RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 NT5MQ9NPB1 228 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 CHST7Q9NS84 486 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 ONECUT1Q9UBC0 465 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 CRLS1Q9UJA2 301 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 HPSEQ9Y251 543 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 FANCAO15360 1455 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 GOLGA8QA0A0J9YX86 632 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 LOC102723971A0A1B0GUV8 181 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 FAM90A27PA6NNH2 459 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 DYNC1I1O14576 645 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 SPINT1O43278 529 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 SIGLEC6O43699 453 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 HS6ST1O60243 411 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 ECE2O60344 883 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 CSDE1O75534 798 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 DNAJB5O75953 348 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 CIAO1O76071 339 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 IL6P05231 212 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 BMP2P12643 396 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 MMP9P14780 707 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 UGT1A6P19224 532 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 NT5EP21589 574 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 DLSTP36957 453 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 ARHGEF7Q14155 803 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 NPY5RQ15761 445 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 CHRNA2Q15822 529 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 NAPEPLDQ6IQ20 393 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 PODNL1Q6PEZ8 512 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 ARHGAP22Q7Z5H3 698 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 KCTD20Q7Z5Y7 419 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 PLCZ1Q86YW0 608 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 ZDHHC14Q8IZN3 488 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 STKLD1Q8NE28 680 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 BPIFB1Q8TDL5 484 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 EGFL8Q99944 293 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 NUDT22Q9BRQ3 303 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 PRRG3Q9BZD7 231 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 TOR3AQ9H497 397 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 CNOT2Q9NZN8 540 aaKnown RBP7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 RAPGEFL1Q9UHV5 662 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 GLI2P10070 1586 aa7.36□□□□□ -1.23
PDGFRA-206ENST00000508170 ASXL1Q8IXJ9 1541 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 PIK3C2GO75747 1445 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 TRAV25A0A0B4J276 109 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 A0A1B0GUL7 405 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 A0A1B0GVM2 712 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 LOC390937A0A1W2PQ73 354 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 A0A1W2PR77 199 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 TMEM247A6NEH6 219 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 OR6C70A6NIJ9 312 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 NRG2O14511 850 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 NRP1O14786 923 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 C4BPAP04003 597 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 PTPN1P18031 435 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CD40LGP29965 261 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 HOXA9P31269 272 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 PTDSS1P48651 473 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CDC34P49427 236 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ACSM1Q08AH1 577 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 DGCR6Q14129 220 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ZSCAN23Q3MJ62 389 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 EEF1DP3Q658K8 133 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 C11orf57Q6ZUT1 292 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CPNE8Q86YQ8 564 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 UBQLNLQ8IYU4 475 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SIRT6Q8N6T7 355 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 PTGR2Q8N8N7 351 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 EXD1Q8NHP7 514 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SLC2A12Q8TD20 617 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ASB15Q8WXK1 588 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ING5Q8WYH8 240 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 GTF3C6Q969F1 213 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 TOP1MTQ969P6 601 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 RAD51AP1Q96B01 352 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SNRNP40Q96DI7 357 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ITPKCQ96DU7 683 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 BSCL2Q96G97 398 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 THOC3Q96J01 351 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CTDSP1Q9GZU7 261 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SRD5A3Q9H8P0 318 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SYNPO2LQ9H987 977 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 GPAMQ9HCL2 828 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ZFP14Q9HCL3 533 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 MKKSQ9NPJ1 570 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ERVK13-1Q9NX77 482 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 CLEC5AQ9NY25 188 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 GDF2Q9UK05 429 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 ZNF148Q9UQR1 794 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 OSGIN2Q9Y236 505 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 RHBDD3Q9Y3P4 386 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SAMHD1Q9Y3Z3 626 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 TIMM13Q9Y5L4 95 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 EIF3AQ14152 1382 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 PRAMEF25A6NGN4 478 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 PRSS29PA6NIE9 313 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 WTIPA6NIX2 430 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SDR42E2A6NKP2 422 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SNPHO15079 494 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 INPPL1O15357 1258 aa7.35□□□□□ -1.23
PDGFRA-206ENST00000508170 SIAH2O43255 324 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms