RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 DNAJC16Q9Y2G8 782 aa7.05□□□□□ -1.28
CLCN3-206ENST00000507875 MED16Q9Y2X0 877 aa7.05□□□□□ -1.28
CLCN3-206ENST00000507875 SESN1Q9Y6P5 492 aa7.05□□□□□ -1.28
CLCN3-206ENST00000507875 CHD7Q9P2D1 2997 aa7.05□□□□□ -1.28
CLCN3-206ENST00000507875 PRUNE2Q8WUY3 3088 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 HMX2A2RU54 273 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 EPOPA6NHQ4 379 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 E2F3O00716 465 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 RASGRF2O14827 1237 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 TSC22D2O75157 780 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 LY86O95711 162 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 TTC4O95801 387 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 AGTP01019 485 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 C8AP07357 584 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 SRGAP2BP0DMP2 458 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 MAPKAPK2P49137 400 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 SLC11A2P49281 568 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 NDST2P52849 883 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 PPP5CP53041 499 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 SLC7A9P82251 487 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 CA9Q16790 459 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 GEN1Q17RS7 908 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 P3H1Q32P28 736 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 TNFAIP8L3Q5GJ75 292 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 OGFOD3Q6PK18 319 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 BEND4Q6ZU67 534 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 SPATA21Q7Z572 469 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 OR8H3Q8N146 312 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 PQLC1Q8N2U9 271 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 ZNF557Q8N988 423 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-206ENST00000507875 ANKRD53Q8N9V6 530 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 DENND1AQ8TEH3 1009 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 TMIGD2Q96BF3 282 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 MRPL38Q96DV4 380 aaKnown RBP7.04□□□□□ -1.28
CLCN3-206ENST00000507875 MEGF10Q96KG7 1140 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 OLFM3Q96PB7 478 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 QKIQ96PU8 341 aaKnown RBP eCLIP7.04□□□□□ -1.28
CLCN3-206ENST00000507875 PSKH2Q96QS6 385 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 CCT8L2Q96SF2 557 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 STMN4Q9H169 189 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-206ENST00000507875 PPANQ9NQ55 473 aaKnown RBP7.04□□□□□ -1.28
CLCN3-206ENST00000507875 OSER1Q9NX31 292 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 PAK5Q9P286 719 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 DNPEPQ9ULA0 475 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 ZNF148Q9UQR1 794 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 KIF26AQ9ULI4 1882 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-206ENST00000507875 GMNCA6NCL1 334 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 E7EVH7 732 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 PSMD3O43242 534 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 ACSL3O95573 720 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 FAM107AO95990 144 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 ZNF3P17036 446 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 ALOX12P18054 663 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 EGR1P18146 543 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 SDHBP21912 280 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 KELP23276 732 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 EVI2BP34910 448 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 CD96P40200 585 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 MMP13P45452 471 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 HARS2P49590 506 aaKnown RBP7.04□□□□□ -1.28
CLCN3-206ENST00000507875 ARPC4P59998 168 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 EFEMP1Q12805 493 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 DUSP6Q16828 381 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 PPP6R3Q5H9R7 873 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-206ENST00000507875 RABGAP1LQ5R372 815 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 PLPP4Q5VZY2 271 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 NCBP2-AS2Q69YL0 99 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 GPR139Q6DWJ6 353 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 TMEM184AQ6ZMB5 413 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 PPP1R21Q6ZMI0 780 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 CHST9Q7L1S5 443 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 TMC8Q8IU68 726 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 GLB1L2Q8IW92 636 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 LILRA3Q8N6C8 439 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-206ENST00000507875 ZNF473Q8WTR7 871 aaKnown RBP7.04□□□□□ -1.28
CLCN3-206ENST00000507875 ASB11Q8WXH4 323 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 HDAC11Q96DB2 347 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 TRAPPC9Q96Q05 1148 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 CCDC177Q9NQR7 707 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-206ENST00000507875 ASAH2Q9NR71 780 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 TMEM248Q9NWD8 314 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 IL1RAPL1Q9NZN1 696 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 PSAT1Q9Y617 370 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 MYO9BQ13459 2157 aa7.04□□□□□ -1.28
CLCN3-206ENST00000507875 TRAV19A0A0A6YYK7 116 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 C5orf60A6NFR6 353 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 SMIM23A6NLE4 172 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 FAM171A2A8MVW0 826 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 MYO1CO00159 1063 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 GCATO75600 419 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 DNAJB5O75953 348 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 TK1P04183 234 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 CD48P09326 243 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 PEPDP12955 493 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 GOT1P17174 413 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 SLCO1A2P46721 670 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 RABIFP47224 123 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 AFF3P51826 1226 aaKnown RBP7.03□□□□□ -1.28
CLCN3-206ENST00000507875 UCP3P55916 312 aa7.03□□□□□ -1.28
CLCN3-206ENST00000507875 PITX1P78337 314 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms