RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 RNF6Q9Y252 685 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 PPIL1Q9Y3C6 166 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 AP1M2Q9Y6Q5 423 aa6.95□□□□□ -1.3
VCAN-207ENST00000507162 A0A0J9YYE9 177 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 FOXN3O00409 490 aaPredicted RBP6.94□□□□□ -1.3
VCAN-207ENST00000507162 LCE2BO14633 110 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 TTI1O43156 1089 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 ARHGEF9O43307 516 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 VEGFDO43915 354 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 KLK8O60259 260 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 ATE1O95260 518 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 HPP00738 406 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 F12P00748 615 aaPredicted RBP6.94□□□□□ -1.3
VCAN-207ENST00000507162 IFNA2P01563 188 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 TRBC1P01850 177 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 TPOP07202 933 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 PNMA6AP0CW24 399 aaPredicted RBP6.94□□□□□ -1.3
VCAN-207ENST00000507162 PRDX3P30048 256 aaKnown RBP6.94□□□□□ -1.3
VCAN-207ENST00000507162 SPINT3P49223 89 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 STX17P56962 302 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 CACNG1Q06432 222 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 IL10RBQ08334 325 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 KRT33BQ14525 404 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 DEFB110Q30KQ9 67 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 ZNF766Q5HY98 468 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 ZNF569Q5MCW4 686 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 HENMT1Q5T8I9 393 aaKnown RBP6.94□□□□□ -1.3
VCAN-207ENST00000507162 SHEQ5VZ18 495 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 TMEM211Q6ICI0 200 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 PODNL1Q6PEZ8 512 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 PAMR1Q6UXH9 720 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 NAPRTQ6XQN6 538 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 TRAPPC5Q8IUR0 188 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 P3H2Q8IVL5 708 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 ZNF547Q8IVP9 402 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 PRSS58Q8IYP2 241 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 GHDCQ8N2G8 530 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 MSANTD4Q8NCY6 345 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 PSMF1Q92530 271 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 RND1Q92730 232 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 NTAN1Q96AB6 310 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 C8orf44Q96CB5 159 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 COX4I2Q96KJ9 171 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 CLSTN2Q9H4D0 955 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 KLHL1Q9NR64 748 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 SLC22A11Q9NSA0 550 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 CHKBQ9Y259 395 aa6.94□□□□□ -1.3
VCAN-207ENST00000507162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.93□□□□□ -1.3
VCAN-207ENST00000507162 C1orf232A0A0U1RR37 186 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 IDSB3KWA1 339 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 GPR89AB7ZAQ6 455 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 EEF2KO00418 725 aaKnown RBP6.93□□□□□ -1.3
VCAN-207ENST00000507162 ZRANB2O95218 330 aaKnown RBP eCLIP6.93□□□□□ -1.3
VCAN-207ENST00000507162 CTSBP07858 339 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 GPR89BP0CG08 455 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 PRR35P0CG20 571 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 MTHFD1P11586 935 aaKnown RBP6.93□□□□□ -1.3
VCAN-207ENST00000507162 CYP11B1P15538 503 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 SLC9A1P19634 815 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 HLA-DPA1P20036 260 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 SOX11P35716 441 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 PTPN9P43378 593 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 SYKP43405 635 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 KIR2DL3P43628 341 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 ST13P50502 369 aaKnown RBP6.93□□□□□ -1.3
VCAN-207ENST00000507162 DLX5P56178 289 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 TMPRSS15P98073 1019 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 PCBP2Q15366 365 aaKnown RBP eCLIP6.93□□□□□ -1.3
VCAN-207ENST00000507162 CAMK4Q16566 473 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 NKG7Q16617 165 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 NAA35Q5VZE5 725 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 HIBCHQ6NVY1 386 aaPredicted RBP6.93□□□□□ -1.3
VCAN-207ENST00000507162 TTI2Q6NXR4 508 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 ARSKQ6UWY0 536 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 KRBA2Q6ZNG9 492 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 ARCQ7LC44 396 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 OVCH1Q7RTY7 1134 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 HOOK3Q86VS8 718 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 AMZ2Q86W34 360 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 KRTAP1-3Q8IUG1 177 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 CREBRFQ8IUR6 639 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 ARHGAP12Q8IWW6 846 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 ULK2Q8IYT8 1036 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 BBS5Q8N3I7 341 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 MARVELD2Q8N4S9 558 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 CPSF7Q8N684 471 aaKnown RBP6.93□□□□□ -1.3
VCAN-207ENST00000507162 MYRIPQ8NFW9 859 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 OR10Q1Q8NGQ4 319 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 GDAP1Q8TB36 358 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 CCHCR1Q8TD31 782 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 CENPIQ92674 756 aaPredicted RBP6.93□□□□□ -1.3
VCAN-207ENST00000507162 HDAC10Q969S8 669 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 ZNF653Q96CK0 615 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 FAM81BQ96LP2 452 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 C12orf66Q96MD2 445 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 TTC25Q96NG3 672 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 INSM2Q96T92 566 aaPredicted RBP6.93□□□□□ -1.3
VCAN-207ENST00000507162 BDH2Q9BUT1 245 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 SRMSQ9H3Y6 488 aa6.93□□□□□ -1.3
VCAN-207ENST00000507162 MRM3Q9HC36 420 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms