RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 EXD1Q8NHP7 514 aa3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 SECISBP2LQ93073 1101 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 NXNL1Q96CM4 212 aa3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 ZNF830Q96NB3 372 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 MS4A10Q96PG2 267 aa3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 TRAF4Q9BUZ4 470 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 OLAHQ9NV23 265 aa3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 TAB2Q9NYJ8 693 aa3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 ANAPC2Q9UJX6 822 aa3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 ZHX1Q9UKY1 873 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 KIAA1210Q9ULL0 1709 aa3.77□□□□□ -1.81
TOPBP1-204ENST00000505804 FLT1P17948 1338 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 A0A087WYN8 130 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 FEZF1A0PJY2 475 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 OR6C76A6NM76 312 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 PRSS1P07477 247 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 PAX1P15863 534 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 CAPZA2P47755 286 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 UBXN2AP68543 259 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 SNTB1Q13884 538 aaKnown RBP3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 LETM2Q2VYF4 491 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 TECRLQ5HYJ1 363 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 WDR38Q5JTN6 314 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 CORO6Q6QEF8 472 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 USP43Q70EL4 1123 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 PLPPR4Q7Z2D5 763 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 DGLUCYQ7Z3D6 616 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 CAMKMTQ7Z624 323 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 CEP57L1Q8IYX8 460 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 CPSF7Q8N684 471 aaKnown RBP3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 TSPAN14Q8NG11 270 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 RNF128Q8TEB7 428 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 TEKT4Q8WW24 435 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 UHRF2Q96PU4 802 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 LMF2Q9BU23 707 aaKnown RBP3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 GPR88Q9GZN0 384 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 BICC1Q9H694 974 aaKnown RBP3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 EQTNQ9NQ60 294 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 OLFML3Q9NRN5 406 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 TUBE1Q9UJT0 475 aa3.76□□□□□ -1.81
TOPBP1-204ENST00000505804 SOS1Q07889 1333 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 HYKKA2RU49 373 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 PRR32B1ATL7 298 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 SPRY1O43609 319 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 CIDEAO60543 219 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 PLOD3O60568 738 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 TADA2AO75478 443 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 CAVIN2O95810 425 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 TRUB2O95900 331 aaKnown RBP3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 OR2T7P0C7T2 308 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 GNAZP19086 355 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 TIMP3P35625 211 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 NR2C2P49116 596 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 CCR3P51677 355 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 CDH11P55287 796 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 RASA2Q15283 850 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 C9orf152Q5JTZ5 239 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 TMPRSS11FQ6ZWK6 438 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 COMMD2Q86X83 199 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 PLD3Q8IV08 490 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 FOXP4Q8IVH2 680 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 ZBTB8BQ8NAP8 495 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 OR2T12Q8NG77 320 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 FCAMRQ8WWV6 532 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 PGLYRP2Q96PD5 576 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 TXLNGYQ9BZA5 131 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 DDX25Q9UHL0 483 aaKnown RBP3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 ACAD8Q9UKU7 415 aa3.75□□□□□ -1.81
TOPBP1-204ENST00000505804 A0A1W2PRB8 838 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 TCRBV21S2A2A0A5A6 115 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 TMEM221A6NGB7 291 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 ERVV-2B6SEH9 535 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 E9PI62 339 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 PLOD2O00469 737 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 MEIS2O14770 477 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 OR10H2O60403 315 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 TSHBP01222 138 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 DANCRP0C864 163 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 FGF5P12034 268 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 SLC9A3P48764 834 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 PPP5CP53041 499 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 DMPKQ09013 629 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 ALCAMQ13740 583 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 KRTAP24-1Q3LI83 254 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 C9orf50Q5SZB4 431 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 ERMARDQ5T6L9 678 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 PLA2G4FQ68DD2 849 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 SLC30A6Q6NXT4 461 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 RPUSD3Q6P087 351 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 KRT74Q7RTS7 529 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 ARHGAP24Q8N264 748 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 NME8Q8N427 588 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 DNAJC22Q8N4W6 341 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 STPG4Q8N801 248 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 TC2NQ8N9U0 490 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 OR13J1Q8NGT2 312 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 OLIG1Q8TAK6 271 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 ERP27Q96DN0 273 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 SPDL1Q96EA4 605 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms