RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 CD46P15529 392 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 ZNF30P17039 623 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 IL4RP24394 825 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 CCR1P32246 355 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 MMP12P39900 470 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 ETV3P41162 512 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 STAT6P42226 847 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 MARSP56192 900 aaKnown RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 GEMIN4P57678 1058 aaKnown RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 UBE2IP63279 158 aaKnown RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 CLDN10P78369 228 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 ARF5P84085 180 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 CDK3Q00526 305 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 ALDH6A1Q02252 535 aaKnown RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 LRRC63Q05C16 580 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 XRCC4Q13426 336 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 ITIH4Q14624 930 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 HYAL4Q2M3T9 481 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 GOLGA7BQ2TAP0 167 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 PTCHD3Q3KNS1 767 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 FAM174BQ3ZCQ3 159 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 PYCR3Q53H96 274 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 CEP85LQ5SZL2 805 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 TMTC4Q5T4D3 741 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 GKAP1Q5VSY0 366 aaPredicted RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 MLIPQ5VWP3 458 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 NAA35Q5VZE5 725 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 SMYD5Q6GMV2 418 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 SPOPLQ6IQ16 392 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 KLHL10Q6JEL2 608 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 TIGD7Q6NT04 549 aaPredicted RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 TTI2Q6NXR4 508 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 CNNM4Q6P4Q7 775 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 WDR59Q6PJI9 974 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 C6orf89Q6UWU4 347 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 TMEM26Q6ZUK4 368 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 STXBP4Q6ZWJ1 553 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 BEND5Q7L4P6 421 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 FGD2Q7Z6J4 655 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 HOOK3Q86VS8 718 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 CCDC71Q8IV32 467 aaPredicted RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 D2HGDHQ8N465 521 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 TTC39CQ8N584 583 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 LRRC17Q8N6Y2 441 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 XXYLT1Q8NBI6 393 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 ARHGEF2Q92974 986 aaKnown RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 TMEM125Q96AQ2 219 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 RSRC1Q96IZ7 334 aaKnown RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 THOC3Q96J01 351 aaKnown RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 VPS50Q96JG6 964 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 PBKQ96KB5 322 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 TUBGCP2Q9BSJ2 902 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 SPON2Q9BUD6 331 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 TRIM62Q9BVG3 475 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 IMPG2Q9BZV3 1241 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 SLC7A5P2Q9GIP4 190 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 STMN4Q9H169 189 aaPredicted RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 ISCUQ9H1K1 167 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 VPS16Q9H269 839 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 FANCEQ9HB96 536 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 ATP13A1Q9HD20 1204 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 PLCB1Q9NQ66 1216 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 HOMER3Q9NSC5 361 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 KBTBD4Q9NVX7 518 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 GPATCH2LQ9NWQ4 482 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 KCTD5Q9NXV2 234 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 TAB2Q9NYJ8 693 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 PLA2G3Q9NZ20 509 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 PTGFRNQ9P2B2 879 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 LPAR3Q9UBY5 353 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 TBC1D29Q9UFV1 150 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 GPN3Q9UHW5 284 aaPredicted RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 TSPAN16Q9UKR8 245 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 DNAJC16Q9Y2G8 782 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 MFHAS1Q9Y4C4 1052 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 PCDHA13Q9Y5I0 950 aa4.1□□□□□ -1.75
CPNE4-204ENST00000505331 BZW2Q9Y6E2 419 aaKnown RBP4.1□□□□□ -1.75
CPNE4-204ENST00000505331 NYNRINQ9P2P1 1898 aaKnown RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 NCOA6Q14686 2063 aaPredicted RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 A0A087X1B8 175 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 TSPAN11A1L157 253 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 NPIPA5E9PKD4 350 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 USP1O94782 785 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 GFPT2O94808 682 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 TRUB2O95900 331 aaKnown RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 CD160O95971 181 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 VIPP01282 170 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 IGLV3-25P01717 112 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 UMODP07911 640 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 HBQ1P09105 142 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 ELFN1P0C7U0 828 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 NID1P14543 1247 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 XRCC1P18887 633 aaPredicted RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 CYP2A7P20853 494 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 MMP11P24347 488 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 TEAD1P28347 426 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 OR1E1P30953 314 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 UBA7P41226 1012 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 PRCPP42785 496 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 MAGEA1P43355 309 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms