RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 TOP3AQ13472 1001 aaPredicted RBP7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 RAPSNQ13702 412 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 C1DQ13901 141 aaKnown RBP7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 SOWAHAQ2M3V2 549 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 INO80DQ53TQ3 878 aaPredicted RBP7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 LINC00523Q86TU6 105 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 DENND1CQ8IV53 801 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 CCDC117Q8IWD4 279 aaPredicted RBP7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 SLC37A3Q8NCC5 494 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 C3orf58Q8NDZ4 430 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 NCSTNQ92542 709 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 MAP6Q96JE9 813 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 MFSD14AQ96MC6 490 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 FAM129BQ96TA1 746 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 TM6SF2Q9BZW4 377 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 NTN4Q9HB63 628 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 SSU72Q9NP77 194 aaKnown RBP7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 PXMP2Q9NR77 195 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 CMTM6Q9NX76 183 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 FETUBQ9UGM5 382 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 NUP50Q9UKX7 468 aa7.69□□□□□ -1.18
ATP2C1-208ENST00000504948 NAV1Q8NEY1 1877 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 DFNA5O60443 496 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 ANXA9O76027 345 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 STSP08842 583 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 PRSS56P0CW18 603 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 SLC2A3P11169 496 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 CAPN3P20807 821 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 PRDX6P30041 224 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 CHI3L1P36222 383 aaPredicted RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 FOXA1P55317 472 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 WNT3AP56704 352 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 HECTD2Q5U5R9 776 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 STEAP3Q658P3 488 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 TRIM40Q6P9F5 258 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 RIOX2Q8IUF8 465 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 SLC38A6Q8IZM9 456 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 CFAP52Q8N1V2 620 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 C1orf127Q8N9H9 656 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 SELENOMQ8WWX9 145 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.68□□□□□ -1.182e-7■■■■■ 62.8
ATP2C1-208ENST00000504948 TRIM43Q96BQ3 446 aaPredicted RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 IL22Q9GZX6 179 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 MED28Q9H204 178 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 ACAD9Q9H845 621 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 UXTQ9UBK9 157 aaPredicted RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 FAM92AA1XBS5 289 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 NFKBIEO00221 500 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 GRIN3BO60391 1043 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 H2AFYO75367 372 aaKnown RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 GOT2P00505 430 aaKnown RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 GBAP04062 536 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 FGRP09769 529 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 CD40LGP29965 261 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 MLLT10P55197 1068 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 PCBP2Q15366 365 aaKnown RBP eCLIP7.68□□□□□ -1.182e-8■■■■■ 33.9
ATP2C1-208ENST00000504948 ATP13A5Q4VNC0 1218 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 CATSPEREQ5SY80 951 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 MEX3DQ86XN8 651 aaKnown RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 OR7G1Q8NGA0 311 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 GTF2H4Q92759 462 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 TNIP3Q96KP6 325 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 PARK7Q99497 189 aaKnown RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 ELAC1Q9H777 363 aaKnown RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 PRDM9Q9NQV7 894 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 PLK2Q9NYY3 685 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 OAS3Q9Y6K5 1087 aaKnown RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 FAM25EA8MYX2 175 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 ISM1B1AKI9 464 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 RFXANKO14593 260 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 DYNC1LI2O43237 492 aaPredicted RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 OR10H3O60404 316 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 RLN1P04808 185 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 SUPT20HL2P0C7V6 817 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 APEHP13798 732 aaKnown RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 DDCP20711 480 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 CEBPGP53567 150 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 CSTF1Q05048 431 aaKnown RBP7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 SCN1BQ07699 218 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 SELENBP1Q13228 472 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 SUPT20HL1Q3ZLR7 823 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 TNFAIP8L3Q5GJ75 292 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 TBPL2Q6SJ96 375 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 HMGB4Q8WW32 186 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 BIRC8Q96P09 236 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 ATG10Q9H0Y0 220 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 FAM198AQ9UFP1 575 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 SLCO3A1Q9UIG8 710 aa7.68□□□□□ -1.18
ATP2C1-208ENST00000504948 LOC105369274A0A096LPK9 316 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 KLF11O14901 512 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 CH25HO95992 272 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 HRGP04196 525 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 CLEC2LP0C7M8 214 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 MBL2P11226 248 aaPredicted RBP7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 CTPS1P17812 591 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 ACADSBP45954 432 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 HNRNPDQ14103 355 aaKnown RBP7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 TREML2Q5T2D2 321 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 MARC1Q5VT66 337 aa7.67□□□□□ -1.18
ATP2C1-208ENST00000504948 MAP1SQ66K74 1059 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms