RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 PLEKHG6Q3KR16 790 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 FUT11Q495W5 492 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 PDCD4Q53EL6 469 aaKnown RBP6.91□□□□□ -1.3
SNX25-202ENST00000504273 COQ5Q5HYK3 327 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 SPOUT1Q5T280 376 aaKnown RBP6.91□□□□□ -1.3
SNX25-202ENST00000504273 DLEU7Q6UYE1 221 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 TPGS1Q6ZTW0 290 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 SPPL2CQ8IUH8 684 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 LURAP1LQ8IV03 231 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 CMTR2Q8IYT2 770 aaKnown RBP6.91□□□□□ -1.3
SNX25-202ENST00000504273 TMEM169Q96HH4 297 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 TMEM74Q96NL1 305 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 HBEGFQ99075 208 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 HOPXQ9BPY8 73 aaPredicted RBP6.91□□□□□ -1.3
SNX25-202ENST00000504273 VCXQ9H320 206 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 VCX3BQ9H321 246 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 ZFYVE1Q9HBF4 777 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 FARSBQ9NSD9 589 aaKnown RBP6.91□□□□□ -1.3
SNX25-202ENST00000504273 MRGBPQ9NV56 204 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 INTS7Q9NVH2 962 aaKnown RBP6.91□□□□□ -1.3
SNX25-202ENST00000504273 HCFC1R1Q9NWW0 138 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 NUDT4Q9NZJ9 180 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 CD274Q9NZQ7 290 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 RABL2AQ9UBK7 228 aaPredicted RBP6.91□□□□□ -1.3
SNX25-202ENST00000504273 EGFL7Q9UHF1 273 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 PPIL1Q9Y3C6 166 aa6.91□□□□□ -1.3
SNX25-202ENST00000504273 C5orf42Q9H799 3197 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 C1orf232A0A0U1RR37 186 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 LEFTY2O00292 366 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 SOCS2O14508 198 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 VPS4BO75351 444 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 MLYCDO95822 493 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 CAPN1P07384 714 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 HOXB3P14651 431 aaPredicted RBP6.9□□□□□ -1.3
SNX25-202ENST00000504273 HRH2P25021 359 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 HLA-FP30511 346 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 GDF5P43026 501 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 ERVK-8P63133 956 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 PRKCQQ04759 706 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 GRIK2Q13002 908 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 CDH18Q13634 790 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 RBBP7Q16576 425 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 RFTN2Q52LD8 501 aaPredicted RBP6.9□□□□□ -1.3
SNX25-202ENST00000504273 SMUG1Q53HV7 270 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 MBOAT1Q6ZNC8 495 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 SNX20Q7Z614 316 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 APLFQ8IW19 511 aaPredicted RBP6.9□□□□□ -1.3
SNX25-202ENST00000504273 ADGRG5Q8IZF4 528 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 OR56A4Q8NGH8 313 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 DDI1Q8WTU0 396 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 LYSMD1Q96S90 227 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 C19orf43Q9BQ61 176 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 CORO1BQ9BR76 489 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 LATS2Q9NRM7 1088 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 HEBP1Q9NRV9 189 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 CCM2LQ9NUG4 571 aaPredicted RBP6.9□□□□□ -1.3
SNX25-202ENST00000504273 CDV3Q9UKY7 258 aaKnown RBP6.9□□□□□ -1.3
SNX25-202ENST00000504273 VPS9D1Q9Y2B5 631 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 PKP3Q9Y446 797 aa6.9□□□□□ -1.3
SNX25-202ENST00000504273 A0A1W2PRU2 124 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 ACOX3O15254 700 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 FFAR2O15552 330 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 OR6B1O95007 311 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 SLC25A14O95258 325 aaPredicted RBP6.9□□□□□ -1.31
SNX25-202ENST00000504273 URODP06132 367 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 MTHFD1P11586 935 aaKnown RBP6.9□□□□□ -1.31
SNX25-202ENST00000504273 CKMT2P17540 419 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 GRIA3P42263 894 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 HSPA7P48741 367 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 STX1BP61266 288 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 DMPKQ09013 629 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 GTF2H2Q13888 395 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 TAF12Q16514 161 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 LIN52Q52LA3 116 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 RARS2Q5T160 578 aaKnown RBP6.9□□□□□ -1.31
SNX25-202ENST00000504273 MPP7Q5T2T1 576 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 LCN8Q6JVE9 175 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 GTF2H2CQ6P1K8 395 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 SLC2A7Q6PXP3 512 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 MACC1Q6ZN28 852 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 DHFR2Q86XF0 187 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 CMTM8Q8IZV2 173 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 ANKFN1Q8N957 763 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 OR2T34Q8NGX1 318 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 OR2T3Q8NH03 318 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 TSPEARQ8WU66 669 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 SLC22A17Q8WUG5 538 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 NCSTNQ92542 709 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 ERLEC1Q96DZ1 483 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 TRAPPC9Q96Q05 1148 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 ASB8Q9H765 288 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 CD207Q9UJ71 328 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 ZNF510Q9Y2H8 683 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 OARD1Q9Y530 152 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 PCDHB1Q9Y5F3 818 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 KIAA1549LQ6ZVL6 1849 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 ATG2AQ2TAZ0 1938 aa6.9□□□□□ -1.31
SNX25-202ENST00000504273 ABHD14A-ACY1A0A1B0GW23 586 aa6.89□□□□□ -1.31
SNX25-202ENST00000504273 TAF4O00268 1085 aa6.89□□□□□ -1.31
SNX25-202ENST00000504273 ARPC2O15144 300 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms