RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ANGPTL3Q9Y5C1 460 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 REV3LO60673 3130 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 OR2AG2A6NM03 316 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 XRCC1P18887 633 aaPredicted RBP20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 ME2P23368 584 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 ARL1P40616 181 aaPredicted RBP20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 IL12RB1P42701 662 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 CTSCP53634 463 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 CREB5Q02930 508 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 FBXL19Q6PCT2 694 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 IL27RAQ6UWB1 636 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 KBTBD6Q86V97 674 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 RETREG3Q86VR2 466 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 TCAIMQ8N3R3 496 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 SFRP1Q8N474 314 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 UCMAQ8WVF2 138 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 TRIM54Q9BYV2 358 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 CXorf56Q9H5V9 222 aa20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 THAP10Q9P2Z0 257 aaPredicted RBP20.9■□□□□ 0.94
UBE2D3-216ENST00000503742 E7ENX8 843 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 SOD1P00441 154 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 ADRB3P13945 408 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 EPB42P16452 691 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 CAPN3P20807 821 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 PIK3CGP48736 1102 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 PRLHRP49683 370 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 GRM2Q14416 872 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 RPS6KA2Q15349 733 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 PDCD4Q53EL6 469 aaKnown RBP20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 BLOC1S3Q6QNY0 202 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 ZNF765Q7L2R6 523 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 SLC26A7Q8TE54 656 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 TSPEARQ8WU66 669 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 PYDC1Q8WXC3 89 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 ROPN1LQ96C74 230 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 MYADMQ96S97 322 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 SLC32A1Q9H598 525 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 TRPS1Q9UHF7 1281 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 CNOT6Q9ULM6 557 aaKnown RBP20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 NDUFAF1Q9Y375 327 aa20.89■□□□□ 0.93
UBE2D3-216ENST00000503742 ANTXRLA6NF34 631 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 NR5A2O00482 541 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 EBLN1P0CF75 366 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 HMOX2P30519 316 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 EIF2DP41214 584 aaKnown RBP20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 ZFP36L2P47974 494 aaKnown RBP20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 TMEM115Q12893 351 aaPredicted RBP20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 ABRAXAS2Q15018 415 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 ATP6AP1LQ52LC2 224 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 PPP1R16AQ96I34 528 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 MAP10Q9P2G4 905 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 CROTQ9UKG9 612 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 COQ6Q9Y2Z9 468 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 CCL27Q9Y4X3 112 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 TMEM202A6NGA9 273 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 TRIM38O00635 465 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 LSM1O15116 133 aaKnown RBP20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 WDR47O94967 919 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 EPORP19235 508 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 SLC6A12P48065 614 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 HNMTP50135 292 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 MS4A2Q01362 244 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 TMEM52BQ4KMG9 183 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 COQ5Q5HYK3 327 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 LRRC70Q7Z2Q7 622 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 NLRP8Q86W28 1048 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 PLCD3Q8N3E9 789 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 PCYOX1LQ8NBM8 494 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 SKA2Q8WVK7 121 aaPredicted RBP20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 SUSD6Q92537 303 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 P2RY13Q9BPV8 354 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 PRSS16Q9NQE7 514 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 HEBP1Q9NRV9 189 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 TMEM45AQ9NWC5 275 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 NMRK1Q9NWW6 199 aa20.88■□□□□ 0.93
UBE2D3-216ENST00000503742 LOC730098B7Z3J9 87 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 PLK4O00444 970 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 TSPAN6O43657 245 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 SYNCRIPO60506 623 aaKnown RBP20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 RECQL5O94762 991 aaPredicted RBP20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 HIST1H2AGP0C0S8 130 aaPredicted RBP20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 PSMC3P17980 439 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 HIST1H2ADP20671 130 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 CYP2A7P20853 494 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 AP1S2P56377 157 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 VPS26BQ4G0F5 336 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 RNF111Q6ZNA4 994 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 ERN2Q76MJ5 926 aaKnown RBP20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 YAF2Q8IY57 180 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 RNF148Q8N7C7 305 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 FNDC5Q8NAU1 212 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 HIST1H2AHQ96KK5 128 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 TEX37Q96LM6 180 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 HIST1H2AJQ99878 128 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 H2AFJQ9BTM1 129 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 EPHX3Q9H6B9 360 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 TMEM181Q9P2C4 612 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 RNF11Q9Y3C5 154 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 CEP290O15078 2479 aa20.87■□□□□ 0.93
UBE2D3-216ENST00000503742 ACOT8O14734 319 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms