RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	PHKG1	Q16816	387 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	ZNF528	Q3MIS6	628 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	PLA2G4E	Q3MJ16	856 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	SYTL3	Q4VX76	610 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	DCP2	Q8IU60	420 aa	Known RBP	11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	NUDCD3	Q8IVD9	361 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	CFAP206	Q8IYR0	622 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	TMEFF1	Q8IYR6	380 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	CCDC63	Q8NA47	563 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	PDPR	Q8NCN5	879 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	FBXO15	Q8NCQ5	510 aa	Predicted RBP	11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	ZNF75CP	Q92670	426 aa	Predicted RBP	11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	PAIP2	Q9BPZ3	127 aa	Known RBP	11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	CARS2	Q9HA77	564 aa	Known RBP	11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	CYP4F12	Q9HCS2	524 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	C11orf16	Q9NQ32	467 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	KL	Q9UEF7	1012 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	ZNHIT2	Q9UHR6	403 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	RNF112	Q9ULX5	631 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	PLEKHM1	Q9Y4G2	1056 aa		11.88	□□□□□ -0.51
MATR3-231	ENST00000502394	WDR91	A4D1P6	747 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	SYCE1L	A8MT33	242 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394		H3BM21	787 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	TRIM13	O60858	407 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	SNN	O75324	88 aa	Predicted RBP	11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	IPO13	O94829	963 aa	Known RBP	11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	SERPINE1	P05121	402 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	TPBGL	P0DKB5	382 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	ACP5	P13686	325 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	MAOB	P27338	520 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	CD38	P28907	300 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	MAPK9	P45984	424 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	GNPDA1	P46926	289 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	CDKL1	Q00532	357 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	SRSF5	Q13243	272 aa	Known RBP	11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	CHI3L2	Q15782	390 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	PLK5	Q496M5	336 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	CDKL4	Q5MAI5	379 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	LIPM	Q5VYY2	423 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	ATG14	Q6ZNE5	492 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	LPCAT2	Q7L5N7	544 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	PDZD3	Q86UT5	571 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	SPATS2	Q86XZ4	545 aa	Known RBP	11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	GPSM1	Q86YR5	675 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	SLC22A9	Q8IVM8	553 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	TRIM42	Q8IWZ5	723 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	ZBTB44	Q8NCP5	570 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	DYDC1	Q8WWB3	177 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	TSACC	Q96A04	125 aa	Predicted RBP	11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	CCDC126	Q96EE4	140 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	L3HYPDH	Q96EM0	354 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	KLHDC7B	Q96G42	594 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	RMDN2	Q96LZ7	410 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	GATA5	Q9BWX5	397 aa	Predicted RBP	11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	C1QTNF3	Q9BXJ4	246 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	ZDHHC5	Q9C0B5	715 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	MANSC1	Q9H8J5	431 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	AASDHPPT	Q9NRN7	309 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	KLC4	Q9NSK0	619 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	PSD3	Q9NYI0	1048 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	NUDT4	Q9NZJ9	180 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	FAM8A1	Q9UBU6	413 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	KLF15	Q9UIH9	416 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	ACSL5	Q9ULC5	683 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	TMCO1	Q9UM00	188 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	PDE10A	Q9Y233	779 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	CEP192	Q8TEP8	1941 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	GON4L	Q3T8J9	2241 aa		11.87	□□□□□ -0.51
MATR3-231	ENST00000502394	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.86	□□□□□ -0.51
MATR3-231	ENST00000502394		A6NCN8	305 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	ARHGEF33	A8MVX0	844 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	STX16-NPEPL1	H3BU86	382 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	STX16	O14662	325 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	FFAR2	O15552	330 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	SMIM24	O75264	130 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	ARRB2	P32121	409 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	CBX1	P83916	185 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	OCRL	Q01968	901 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	BST1	Q10588	318 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	LRP8	Q14114	963 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	WDR45B	Q5MNZ6	344 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	WASH2P	Q6VEQ5	465 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	ZCCHC23	Q6ZST2	131 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	UBE2R2	Q712K3	238 aa	Predicted RBP	11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	CHST15	Q7LFX5	561 aa	Predicted RBP	11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	TAX1BP1	Q86VP1	789 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	NRROS	Q86YC3	692 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	UBTD2	Q8WUN7	234 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	ZC3H10	Q96K80	434 aa	Known RBP	11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	TMEM237	Q96Q45	408 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	TMEM168	Q9H0V1	697 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	CAAP1	Q9H8G2	361 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	PARVB	Q9HBI1	364 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	WASH6P	Q9NQA3	447 aa		11.86	□□□□□ -0.51
MATR3-231	ENST00000502394	NCKIPSD	Q9NZQ3	722 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms