RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 YAE1D1Q9NRH1 226 aa5.08□□□□□ -1.6
FXN-205ENST00000498653 GPATCH2LQ9NWQ4 482 aa5.08□□□□□ -1.6
FXN-205ENST00000498653 ARHGEF38Q9NXL2 777 aa5.08□□□□□ -1.6
FXN-205ENST00000498653 DNAI1Q9UI46 699 aa5.08□□□□□ -1.6
FXN-205ENST00000498653 PADI1Q9ULC6 663 aa5.08□□□□□ -1.6
FXN-205ENST00000498653 FZD10Q9ULW2 581 aa5.08□□□□□ -1.6
FXN-205ENST00000498653 AP4E1Q9UPM8 1137 aa5.08□□□□□ -1.6
FXN-205ENST00000498653 ZNF510Q9Y2H8 683 aa5.08□□□□□ -1.6
FXN-205ENST00000498653 ZNF835Q9Y2P0 537 aa5.08□□□□□ -1.6
FXN-205ENST00000498653 JRKLQ9Y4A0 524 aa5.08□□□□□ -1.6
FXN-205ENST00000498653 PCDHA3Q9Y5H8 950 aa5.08□□□□□ -1.6
FXN-205ENST00000498653 LRRD1A4D1F6 860 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 A6NNC1 897 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 A8MU76 341 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 EEF2KO00418 725 aaKnown RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 FPGTO14772 594 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 TMPRSS2O15393 492 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 DAPK3O43293 454 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 KLK8O60259 260 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 ZNF500O60304 480 aaPredicted RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 PAGE1O75459 146 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 IPO13O94829 963 aaKnown RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 ZRANB2O95218 330 aaKnown RBP eCLIP5.07□□□□□ -1.6
FXN-205ENST00000498653 PAK4O96013 591 aaPredicted RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 PYGMP11217 842 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 TCF4P15884 667 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 TACR2P21452 398 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 VAMP1P23763 118 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 IL1R2P27930 398 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 L1CAMP32004 1257 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 CTNNA1P35221 906 aaKnown RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 IGFALSP35858 605 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 ARL4AP40617 200 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 COMPP49747 757 aaPredicted RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 PEX5P50542 639 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 DNA2P51530 1060 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 ZNF135P52742 658 aaPredicted RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 RRADP55042 308 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 CDH6P55285 790 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 DLX5P56178 289 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 RWDD2BP57060 319 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 SLC25A11Q02978 314 aaKnown RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 PDK2Q15119 407 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 ATP13A4Q4VNC1 1196 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 PPP6R3Q5H9R7 873 aaPredicted RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 RABGAP1LQ5R372 815 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 SEL1L2Q5TEA6 688 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 TXNRD3NBQ6F5E7 133 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 RPUSD3Q6P087 351 aaKnown RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 FAM199XQ6PEV8 388 aaPredicted RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 IGFL2Q6UWQ7 119 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 LRRC31Q6UY01 552 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 SYT10Q6XYQ8 523 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 CHSY1Q86X52 802 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 RELL1Q8IUW5 271 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 CCDC50Q8IVM0 306 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 KATNAL2Q8IYT4 538 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 RCOR2Q8IZ40 523 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 LGI2Q8N0V4 545 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 MAPK1IP1LQ8NDC0 245 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 EXD1Q8NHP7 514 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 COG1Q8WTW3 980 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 KRT35Q92764 455 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 HES6Q96HZ4 224 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 RBM41Q96IZ5 413 aaKnown RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 MEGF10Q96KG7 1140 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 C1orf74Q96LT6 269 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 LENG8Q96PV6 779 aaPredicted RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 WDR24Q96S15 920 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 PEBP4Q96S96 227 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 RBM15Q96T37 977 aaKnown RBP eCLIP5.07□□□□□ -1.6
FXN-205ENST00000498653 TLR10Q9BXR5 811 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 SLC17A9Q9BYT1 436 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 SIK2Q9H0K1 926 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 PCDH18Q9HCL0 1135 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 ANLNQ9NQW6 1124 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.07□□□□□ -1.6
FXN-205ENST00000498653 SEC14L3Q9UDX4 400 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 OR12D3Q9UGF7 316 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 SLCO3A1Q9UIG8 710 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 PACSIN2Q9UNF0 486 aaPredicted RBP5.07□□□□□ -1.6
FXN-205ENST00000498653 ERVW-1Q9UQF0 538 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 HS3ST4Q9Y661 456 aa5.07□□□□□ -1.6
FXN-205ENST00000498653 CSMD3Q7Z407 3707 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 GOLGA6L7A0A1B0GV03 622 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 TYW5A2RUC4 315 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 ZNF487B1APH4 448 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 F5H5T6 163 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 RNF103O00237 685 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 CEP104O60308 925 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 SRGAP2O75044 1071 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 TIAF1O95411 115 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 PROCP04070 461 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 ASLP04424 464 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 ATP1A1P05023 1023 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 TCP1P17987 556 aaKnown RBP5.06□□□□□ -1.6
FXN-205ENST00000498653 KDELR1P24390 212 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 HTR7P34969 479 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 MARCKSL1P49006 195 aa5.06□□□□□ -1.6
FXN-205ENST00000498653 HCAR3P49019 387 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms