RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 MAPK15Q8TD08 544 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 SLC37A2Q8TED4 501 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 MZB1Q8WU39 189 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 KCTD4Q8WVF5 259 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 ANKRD49Q8WVL7 239 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 EXT2Q93063 718 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 ISL2Q96A47 359 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 TSNARE1Q96NA8 513 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 FOPNLQ96NB1 174 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 ACBD3Q9H3P7 528 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 STN1Q9H668 368 aaKnown RBP13.26□□□□□ -0.29
CPNE1-227ENST00000498056 DNAAF2Q9NVR5 837 aaKnown RBP13.26□□□□□ -0.29
CPNE1-227ENST00000498056 SCHIP1Q9P0W5 487 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-227ENST00000498056 KLHL42Q9P2K6 505 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 ASF1AQ9Y294 204 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 A0A1W2PPM1 405 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 PABPN1LA6NDY0 278 aaKnown RBP13.25□□□□□ -0.29
CPNE1-227ENST00000498056 EIF3FO00303 357 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-227ENST00000498056 BTN3A1O00481 513 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 DYNC1I1O14576 645 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 CDX4O14627 284 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-227ENST00000498056 FLRT2O43155 660 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 GDF9O60383 454 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 FOXD2O60548 495 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-227ENST00000498056 GFRA3O60609 400 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 SASH3O75995 380 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 SLCO2B1O94956 709 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 WISP3O95389 354 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-227ENST00000498056 TSPAN12O95859 305 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 TOP3BO95985 862 aaKnown RBP13.25□□□□□ -0.29
CPNE1-227ENST00000498056 MPOP05164 745 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 MPC1LP0DKB6 136 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 GRK6P43250 576 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 ABRQ12979 859 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 DNAJC3Q13217 504 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 KRT33BQ14525 404 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 CLCA4Q14CN2 919 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 RPE65Q16518 533 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 PPM1JQ5JR12 505 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 AGAP9Q5VTM2 703 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 ZCCHC8Q6NZY4 707 aaKnown RBP13.25□□□□□ -0.29
CPNE1-227ENST00000498056 LVRNQ6Q4G3 990 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 UNC5DQ6UXZ4 953 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 WASH2PQ6VEQ5 465 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 NAGSQ8N159 534 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 C4orf33Q8N1A6 199 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 GOLGA6L1Q8N7Z2 621 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 OR4C6Q8NH72 309 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 SETD7Q8WTS6 366 aaKnown RBP13.25□□□□□ -0.29
CPNE1-227ENST00000498056 CABS1Q96KC9 395 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 DUSP23Q9BVJ7 150 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 VIPAS39Q9H9C1 493 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 WASH6PQ9NQA3 447 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 ZNF446Q9NWS9 450 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 PCOLCE2Q9UKZ9 415 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 BTBD3Q9Y2F9 522 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 ACOT9Q9Y305 439 aa13.25□□□□□ -0.29
CPNE1-227ENST00000498056 KIR2DS5A0A0G2JLQ3 304 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 A0A0G2JNG1 304 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 C4orf47A7E2U8 309 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 KIR2DS3K7RE56 304 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 TRIM38O00635 465 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 NOBOXO60393 691 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 RFPL1O75677 317 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 CATP04040 527 aaKnown RBP13.24□□□□□ -0.29
CPNE1-227ENST00000498056 LTA4HP09960 611 aaKnown RBP13.24□□□□□ -0.29
CPNE1-227ENST00000498056 GIMD1P0DJR0 217 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 PYGBP11216 843 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 GLRBP48167 497 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 HHEXQ03014 270 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 SP140Q13342 867 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 KIR2DS5Q14953 304 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 SUZ12Q15022 739 aaKnown RBP13.24□□□□□ -0.29
CPNE1-227ENST00000498056 C14orf28Q4W4Y0 310 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 CAPRIN2Q6IMN6 1127 aaKnown RBP13.24□□□□□ -0.29
CPNE1-227ENST00000498056 KLC3Q6P597 504 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 ABRAXAS1Q6UWZ7 409 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 TIFABQ6ZNK6 161 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 NEK10Q6ZWH5 1172 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 FRA10AC1Q70Z53 315 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 UBE2R2Q712K3 238 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-227ENST00000498056 CCDC91Q7Z6B0 441 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 SLC9B2Q86UD5 537 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 TRABD2AQ86V40 505 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 SLC35F3Q8IY50 421 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 CENPLQ8N0S6 344 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-227ENST00000498056 SFRP1Q8N474 314 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 OR5AR1Q8NGP9 310 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 TFGQ92734 400 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-227ENST00000498056 SCYL1Q96KG9 808 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 INSM2Q96T92 566 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-227ENST00000498056 STMN4Q9H169 189 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-227ENST00000498056 TRIT1Q9H3H1 467 aaKnown RBP13.24□□□□□ -0.29
CPNE1-227ENST00000498056 POT1Q9NUX5 634 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 PCDHGB2Q9Y5G2 931 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 HEBP2Q9Y5Z4 205 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 ASXL3Q9C0F0 2248 aa13.24□□□□□ -0.29
CPNE1-227ENST00000498056 ADAMTS20P59510 1910 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-227ENST00000498056 KRT87PA6NCN2 255 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms