RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 CHRM1P11229 460 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-215ENST00000496447 MED22Q15528 200 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 TBC1D21Q8IYX1 336 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 FITM2Q8N6M3 262 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 NTAN1Q96AB6 310 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 ZNF599Q96NL3 588 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 CITED4Q96RK1 184 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 RIOK2Q9BVS4 552 aaKnown RBP12.94□□□□□ -0.34
PTPRF-215ENST00000496447 EDDM13A0A1B0GTR0 161 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 TP73O15350 636 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 TNFP01375 233 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 CD247P20963 164 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 CCKBRP32239 447 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 HSD17B2P37059 387 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 SLC11A1P49279 550 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 PTPN5P54829 565 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 KLF10Q13118 480 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 CLNKQ7Z7G1 428 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 SAMD14Q8IZD0 417 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-215ENST00000496447 SLC22A18Q96BI1 424 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 TDP1Q9NUW8 608 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 GABRDO14764 452 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 KERAO60938 352 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 TMCC2O75069 709 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 KHDRBS3O75525 346 aaKnown RBP12.94□□□□□ -0.34
PTPRF-215ENST00000496447 DBTP11182 482 aaKnown RBP12.94□□□□□ -0.34
PTPRF-215ENST00000496447 SLC26A3P40879 764 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 LSM3P62310 102 aaKnown RBP12.94□□□□□ -0.34
PTPRF-215ENST00000496447 LRRC32Q14392 662 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 FASTKD3Q14CZ7 662 aaKnown RBP12.94□□□□□ -0.34
PTPRF-215ENST00000496447 SH3PXD2AQ5TCZ1 1133 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 GRASPQ7Z6J2 395 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-215ENST00000496447 UBE2Q1Q7Z7E8 422 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 SATL1Q86VE3 508 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 CRYBG2Q8N1P7 616 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 SSR3Q9UNL2 185 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 NR2E1Q9Y466 385 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 FAM92AA1XBS5 289 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 PIGRP01833 764 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 IFNW1P05000 195 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 NDUFS1P28331 727 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 CASP9P55211 416 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 RPP38P78345 283 aaKnown RBP12.94□□□□□ -0.34
PTPRF-215ENST00000496447 DPYSL2Q16555 572 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 FBXL22Q6P050 247 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 PIGWQ7Z7B1 504 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 MPP5Q8N3R9 675 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 TRNT1Q96Q11 434 aaKnown RBP12.94□□□□□ -0.34
PTPRF-215ENST00000496447 CCNB1IP1Q9NPC3 277 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 ZNF460Q14592 562 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 TEAD2Q15562 447 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 ARL13AQ5H913 290 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-215ENST00000496447 ADGRD1Q6QNK2 874 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 GALNT7Q86SF2 657 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 DAW1Q8N136 415 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 C11orf65Q8NCR3 313 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 GPER1Q99527 375 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 BTBD1Q9H0C5 482 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 ARL8BQ9NVJ2 186 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 SPEF1Q9Y4P9 236 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 FABP3P05413 133 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 KIAA0930Q6ICG6 404 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-215ENST00000496447 RANBP3LQ86VV4 465 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-215ENST00000496447 KCTD13Q8WZ19 329 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 SPOCK2Q92563 424 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 ZHX1-C8orf76Q96EF9 292 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 FCRL4Q96PJ5 515 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 MINDY3Q9H8M7 445 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 ANKHQ9HCJ1 492 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 PDP1Q9P0J1 537 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-215ENST00000496447 RAPGEFL1Q9UHV5 662 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 WNT6Q9Y6F9 365 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 LTBP3Q9NS15 1303 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 ELOVL7A1L3X0 281 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-215ENST00000496447 ZNF8P17098 575 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-215ENST00000496447 MLLT3P42568 568 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-215ENST00000496447 CDK9P50750 372 aaKnown RBP12.93□□□□□ -0.34
PTPRF-215ENST00000496447 ARFIP1P53367 373 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 ZNF792Q3KQV3 632 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 LPCAT4Q643R3 524 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 ZNF776Q68DI1 518 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-215ENST00000496447 RASGRP3Q8IV61 690 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 COX18Q8N8Q8 333 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 HBEGFQ99075 208 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 MARCH7Q9H992 704 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 CKLFQ9UBR5 152 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 CDH7Q9ULB5 785 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 PRPS2P11908 318 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 KCNA5P22460 613 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 SLC1A2P43004 574 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 SNAPC1Q16533 368 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 GPR33Q49SQ1 333 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 GJD3Q8N144 294 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 TRPV3Q8NET8 790 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 NARS2Q96I59 477 aaKnown RBP12.93□□□□□ -0.34
PTPRF-215ENST00000496447 UBE2QL1A1L167 161 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 TRIM64CA6NLI5 447 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 C9J4A7 227 aa12.93□□□□□ -0.34
PTPRF-215ENST00000496447 PSMD11O00231 422 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms