RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 H7C0S8 307 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 DLGAP1O14490 977 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 CLOCKO15516 846 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 AP1G1O43747 822 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 ZNF821O75541 412 aaPredicted RBP11.31□□□□□ -0.6
CDCA7-208ENST00000496441 BMP2P12643 396 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 MERTKQ12866 999 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 FOXD4Q12950 439 aaPredicted RBP11.31□□□□□ -0.6
CDCA7-208ENST00000496441 MAPKAPK3Q16644 382 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 PGS1Q32NB8 556 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 PABPC1LQ4VXU2 614 aaKnown RBP11.31□□□□□ -0.6
CDCA7-208ENST00000496441 TPGS2Q68CL5 300 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 DPY19L3Q6ZPD9 716 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 HID1Q8IV36 788 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 VRK3Q8IV63 474 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 AQP12AQ8IXF9 295 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 SLC39A11Q8N1S5 342 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 ZUFSPQ96AP4 578 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 CENPNQ96H22 339 aaPredicted RBP11.31□□□□□ -0.6
CDCA7-208ENST00000496441 DCUN1D5Q9BTE7 237 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 DPY30Q9C005 99 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 BRINP2Q9C0B6 783 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 SLC6A13Q9NSD5 602 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 PCDHB1Q9Y5F3 818 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 TNPO3Q9Y5L0 923 aaKnown RBP11.31□□□□□ -0.6
CDCA7-208ENST00000496441 COMMD3-BMI1R4GMX3 469 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 MICAL3Q7RTP6 2002 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 FOXD2O60548 495 aaPredicted RBP11.31□□□□□ -0.6
CDCA7-208ENST00000496441 C1QCP02747 245 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 EPB42P16452 691 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 LHCGRP22888 699 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 EEF1B2P24534 225 aaKnown RBP11.31□□□□□ -0.6
CDCA7-208ENST00000496441 CCR7P32248 378 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 SPAM1P38567 509 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 CCT8P50990 548 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 ZNF697Q5TEC3 545 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 ENPP6Q6UWR7 440 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 CERS6Q6ZMG9 384 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 EFL1Q7Z2Z2 1120 aaKnown RBP11.31□□□□□ -0.6
CDCA7-208ENST00000496441 STK32CQ86UX6 486 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 CLEC4FQ8N1N0 589 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 NXPE1Q8N323 547 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 ANKFN1Q8N957 763 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 LMNTD1Q8N9Z9 388 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 OR2AP1Q8NGE2 309 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 ITFG1Q8TB96 612 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 TFAP2CQ92754 450 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 CGREF1Q99674 301 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 LRRC3Q9BY71 257 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 CD244Q9BZW8 370 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 SPG21Q9NZD8 308 aa11.31□□□□□ -0.6
CDCA7-208ENST00000496441 VCANP13611 3396 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 NOBOXO60393 691 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 FKTNO75072 461 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 GMNNO75496 209 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 RFPL2O75678 378 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 LDLRP01130 860 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 SRCP12931 536 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 ITGB8P26012 769 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 NR1H2P55055 460 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 RAB33AQ14088 237 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 MAP7Q14244 749 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 TMEM259Q4ZIN3 620 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 SUSD1Q6UWL2 747 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 DLEU7Q6UYE1 221 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 GALNT10Q86SR1 603 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 CYB5D2Q8WUJ1 264 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 RHBDF1Q96CC6 855 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 TCEAL4Q96EI5 215 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 TRMT2BQ96GJ1 504 aaKnown RBP11.3□□□□□ -0.6
CDCA7-208ENST00000496441 HIC2Q96JB3 615 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 EGLN2Q96KS0 407 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 OR52E6Q96RD3 313 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 EBPLQ9BY08 206 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 SLC46A2Q9BY10 475 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 LINC00597Q9H2U6 94 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 PNPLA3Q9NST1 481 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 PTBP2Q9UKA9 531 aaKnown RBP11.3□□□□□ -0.6
CDCA7-208ENST00000496441 FADS3Q9Y5Q0 445 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 H3BNH8 94 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 TMX2-CTNND1H3BSU7 103 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 LEFTY2O00292 366 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 GNGT2O14610 69 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 STK16O75716 305 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 GLUD1P00367 558 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 C8AP07357 584 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 PIM1P11309 404 aaPredicted RBP11.3□□□□□ -0.6
CDCA7-208ENST00000496441 VARSP26640 1264 aaKnown RBP11.3□□□□□ -0.6
CDCA7-208ENST00000496441 TXNL4AP83876 142 aaKnown RBP11.3□□□□□ -0.6
CDCA7-208ENST00000496441 IL1RL1Q01638 556 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 PTSQ03393 145 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 CBX2Q14781 532 aaPredicted RBP11.3□□□□□ -0.6
CDCA7-208ENST00000496441 PCBP2Q15366 365 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDCA7-208ENST00000496441 PDCD4Q53EL6 469 aaKnown RBP11.3□□□□□ -0.6
CDCA7-208ENST00000496441 SLC39A5Q6ZMH5 540 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 UBE2R2Q712K3 238 aaPredicted RBP11.3□□□□□ -0.6
CDCA7-208ENST00000496441 SLC13A3Q8WWT9 602 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 SELENOMQ8WWX9 145 aa11.3□□□□□ -0.6
CDCA7-208ENST00000496441 COPS8Q99627 209 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms