RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 GOT2P00505 430 aaKnown RBP15.29■□□□□ 0.04
HDAC4-213ENST00000496347 OR56A5P0C7T3 313 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 ZNF28P17035 718 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 RPL22P35268 128 aaKnown RBP15.29■□□□□ 0.04
HDAC4-213ENST00000496347 PPARGP37231 505 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-213ENST00000496347 PREPP48147 710 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 KPNA2P52292 529 aaKnown RBP15.29■□□□□ 0.04
HDAC4-213ENST00000496347 CYP4F2P78329 520 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 BASP1P80723 227 aaKnown RBP15.29■□□□□ 0.04
HDAC4-213ENST00000496347 CDK16Q00536 496 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 CDC20Q12834 499 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 BOP1Q14137 746 aaKnown RBP15.29■□□□□ 0.04
HDAC4-213ENST00000496347 TBR1Q16650 682 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 ARMC3Q5W041 872 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 GSTA5Q7RTV2 222 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 PRUNE1Q86TP1 453 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 MPP5Q8N3R9 675 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 OR4L1Q8NH43 312 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 ELMO1Q92556 727 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 HDAC10Q969S8 669 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 TSSK1BQ9BXA7 367 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 ADNPQ9H2P0 1102 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 FGF21Q9NSA1 209 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 SLC2A6Q9UGQ3 507 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 GSAPA4D1B5 854 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 CEP104O60308 925 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 SPAG6O75602 509 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 FAM87AP0C7U9 286 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 MSL3P1P0C860 447 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 EBLN1P0CF75 366 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 ZSCAN5DPP0CG00 497 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 FOLR1P15328 257 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 TPSB2P20231 275 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 PDHA2P29803 388 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 KCNAB1Q14722 419 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 TPSAB1Q15661 275 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 TMTC4Q5T4D3 741 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 MICALCLQ6ZW33 695 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 ZNF534Q76KX8 674 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 UNC5BQ8IZJ1 945 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 GALNT6Q8NCL4 622 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 OR4E2Q8NGC2 313 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 OR52E1Q8NGJ3 308 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 OR6P1Q8NGX9 317 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 TFGQ92734 400 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-213ENST00000496347 ELMO2Q96JJ3 720 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 FERD3LQ96RJ6 166 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 HGH1Q9BTY7 390 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 PITPNM3Q9BZ71 974 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 FANCEQ9HB96 536 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 LATS2Q9NRM7 1088 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 C1GALT1Q9NS00 363 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 SOHLH2Q9NX45 425 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 PRSS21Q9Y6M0 314 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 SNRNP200O75643 2136 aaKnown RBP15.28■□□□□ 0.04
HDAC4-213ENST00000496347 SPTBP11277 2137 aa15.28■□□□□ 0.04
HDAC4-213ENST00000496347 SEC16AO15027 2179 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 C21orf140B9A014 251 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 BTN3A1O00481 513 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 TERTO14746 1132 aaKnown RBP15.27■□□□□ 0.04
HDAC4-213ENST00000496347 CPNE3O75131 537 aaKnown RBP15.27■□□□□ 0.04
HDAC4-213ENST00000496347 PLA2G2AP14555 144 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 POLR2CP19387 275 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-213ENST00000496347 SHMT2P34897 504 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 TTPAP49638 278 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 FASTKD1Q53R41 847 aaKnown RBP15.27■□□□□ 0.04
HDAC4-213ENST00000496347 PCID2Q5JVF3 399 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 ZNF605Q86T29 641 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 AMIGO1Q86WK6 493 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 EXD3Q8N9H8 876 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 ZNF778Q96MU6 729 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 MRM3Q9HC36 420 aaKnown RBP15.27■□□□□ 0.04
HDAC4-213ENST00000496347 SYTL2Q9HCH5 934 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 TREX1Q9NSU2 369 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 STARD5Q9NSY2 213 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 CATSPERZQ9NTU4 200 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 BFARQ9NZS9 450 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 IL17BQ9UHF5 180 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 TUBD1Q9UJT1 453 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 KCND3Q9UK17 655 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 CROTQ9UKG9 612 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 JRKLQ9Y4A0 524 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 PCDHGA6Q9Y5G7 932 aa15.27■□□□□ 0.04
HDAC4-213ENST00000496347 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.26■□□□□ 0.03
HDAC4-213ENST00000496347 SLC5A10A0PJK1 596 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 C2orf74A8MZ97 194 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 B8ZZF3 427 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 MAP3K7O43318 606 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 KDM1AO60341 852 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 OR1I1O60431 355 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 TIAF1O95411 115 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 CCNYL3P0C7X3 344 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 CDH3P22223 829 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 ACADLP28330 430 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 CXCR5P32302 372 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 DLSTP36957 453 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 MAGEA6P43360 314 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 CCR10P46092 362 aa15.26■□□□□ 0.03
HDAC4-213ENST00000496347 ARCN1P48444 511 aaKnown RBP15.26■□□□□ 0.03
HDAC4-213ENST00000496347 SESN2P58004 480 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms