RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 NOD2Q9HC29 1040 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 MRPS2Q9Y399 296 aaKnown RBP8.52□□□□□ -1.05
GARNL3-219ENST00000495172 CR1P17927 2039 aa8.52□□□□□ -1.05
GARNL3-219ENST00000495172 A0A0G2JK05 382 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 BECN2A8MW95 431 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 OR2B3O76000 313 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 EPB41P11171 864 aaKnown RBP8.51□□□□□ -1.05
GARNL3-219ENST00000495172 ALAS2P22557 587 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 UQCRC1P31930 480 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 USP8P40818 1118 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 RFC3P40938 356 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 STC1P52823 247 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 MAXP61244 160 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 EEF1A2Q05639 463 aaKnown RBP8.51□□□□□ -1.05
GARNL3-219ENST00000495172 FILIP1LQ4L180 1135 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 EMC4Q5J8M3 183 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 TIGD7Q6NT04 549 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-219ENST00000495172 RHBDD2Q6NTF9 364 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-219ENST00000495172 LAPTM4BQ86VI4 370 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 NLRP8Q86W28 1048 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 OOSP2Q86WS3 158 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 KBTBD2Q8IY47 623 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 GHDCQ8N2G8 530 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.51□□□□□ -1.05
GARNL3-219ENST00000495172 OR4E2Q8NGC2 313 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 SUN3Q8TAQ9 357 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 FAM57AQ8TBR7 257 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 SLC20A1Q8WUM9 679 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 NAT14Q8WUY8 206 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 PIH1D2Q8WWB5 315 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 SLCO2A1Q92959 643 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 MCCC1Q96RQ3 725 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-219ENST00000495172 SLC39A8Q9C0K1 460 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 LRRC19Q9H756 370 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 YAE1D1Q9NRH1 226 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 IMP3Q9NV31 184 aaKnown RBP8.51□□□□□ -1.05
GARNL3-219ENST00000495172 SEPT11Q9NVA2 429 aaKnown RBP8.51□□□□□ -1.05
GARNL3-219ENST00000495172 POMT2Q9UKY4 750 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 CNTN6Q9UQ52 1028 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 ZNF407Q9C0G0 2248 aa8.51□□□□□ -1.05
GARNL3-219ENST00000495172 GSAPA4D1B5 854 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 CLDN4O14493 209 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 MED7O43513 233 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 SMPD2O60906 423 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 CNOT4O95628 575 aaKnown RBP8.5□□□□□ -1.05
GARNL3-219ENST00000495172 HPP00738 406 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 PNMA6AP0CW24 399 aaPredicted RBP8.5□□□□□ -1.05
GARNL3-219ENST00000495172 EGR1P18146 543 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 MX2P20592 715 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 IDSP22304 550 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 RPL13P26373 211 aaKnown RBP8.5□□□□□ -1.05
GARNL3-219ENST00000495172 KRT9P35527 623 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 FMO5P49326 533 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 DEFA6Q01524 100 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 ZNF33BQ06732 778 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 DMTNQ08495 405 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 SLC10A7Q0GE19 358 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 IHHQ14623 411 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 ZIC1Q15915 447 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 PARP15Q460N3 678 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 FLYWCH1Q4VC44 716 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 ALS2CLQ60I27 953 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 SPINK14Q6IE38 97 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 ARMC6Q6NXE6 501 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 KLHL35Q6PF15 583 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 ARHGEF18Q6ZSZ5 1173 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 DAAM2Q86T65 1068 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 C3orf20Q8ND61 904 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 OR10Q1Q8NGQ4 319 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 PAGE5Q96GU1 130 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 C17orf62Q9BQA9 187 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 AP1M1Q9BXS5 423 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 KCTD5Q9NXV2 234 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 GNPTGQ9UJJ9 305 aa8.5□□□□□ -1.05
GARNL3-219ENST00000495172 CMYA5Q8N3K9 4069 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 MBD3L4A6NDZ8 208 aaPredicted RBP8.49□□□□□ -1.05
GARNL3-219ENST00000495172 MBD3L5A6NJ08 208 aaPredicted RBP8.49□□□□□ -1.05
GARNL3-219ENST00000495172 TTI1O43156 1089 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 MAN1A2O60476 641 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 CDC40O60508 579 aaKnown RBP eCLIP8.49□□□□□ -1.05
GARNL3-219ENST00000495172 PDE9AO76083 593 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 USP1O94782 785 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 PGLSO95336 258 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 HBQ1P09105 142 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 COX6A1P12074 109 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 TACR1P25103 407 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 PTGS2P35354 604 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 OR1D4P47884 311 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 YBEYP58557 167 aaPredicted RBP8.49□□□□□ -1.05
GARNL3-219ENST00000495172 AP1S1P61966 158 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 HENMT1Q5T8I9 393 aaKnown RBP8.49□□□□□ -1.05
GARNL3-219ENST00000495172 ATG9BQ674R7 924 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 KAZNQ674X7 775 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 GALNTL5Q7Z4T8 443 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 WDR53Q7Z5U6 358 aaPredicted RBP8.49□□□□□ -1.05
GARNL3-219ENST00000495172 LRRTM4Q86VH4 590 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 RBM12BQ8IXT5 1001 aaKnown RBP8.49□□□□□ -1.05
GARNL3-219ENST00000495172 GPR135Q8IZ08 494 aa8.49□□□□□ -1.05
GARNL3-219ENST00000495172 LGI4Q8N135 537 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms