RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 APBA1Q02410 837 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 PRKAA1Q13131 559 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 CBLBQ13191 982 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 PCBP2Q15366 365 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 DEFB110Q30KQ9 67 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 Q5PR19 223 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 PODNL1Q6PEZ8 512 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 KRBA2Q6ZNG9 492 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 CCDC71Q8IV32 467 aaPredicted RBP13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 C3orf20Q8ND61 904 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 CENPIQ92674 756 aaPredicted RBP13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 VPS50Q96JG6 964 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 TRIM51Q9BSJ1 452 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 DEF6Q9H4E7 631 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 SOX17Q9H6I2 414 aaPredicted RBP13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 SLC24A2Q9UI40 661 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 CFAP45Q9UL16 551 aa13.97□□□□□ -0.17
CHMP2B-205ENST00000494980 A0A1B0GVL5 298 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 C2CD4BA6NLJ0 364 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 ZSCAN9O15535 394 aaPredicted RBP13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 CTSBP07858 339 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 MYBL2P10244 700 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 HSPA9P38646 679 aaKnown RBP13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 PTPN9P43378 593 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 DCAF7P61962 342 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 TMPRSS15P98073 1019 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 SNTB1Q13884 538 aaKnown RBP13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 NKG7Q16617 165 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 ZNF766Q5HY98 468 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 FGD2Q7Z6J4 655 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 TRAPPC5Q8IUR0 188 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 GHDCQ8N2G8 530 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 ZNF655Q8N720 491 aaPredicted RBP13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 JOSD2Q8TAC2 188 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 SLC20A1Q8WUM9 679 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 FKBP10Q96AY3 582 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 MGME1Q9BQP7 344 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 SPATA16Q9BXB7 569 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 PITPNM3Q9BZ71 974 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 WDR54Q9H977 334 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 DMRT3Q9NQL9 472 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 ASB1Q9Y576 335 aa13.96□□□□□ -0.17
CHMP2B-205ENST00000494980 C1orf232A0A0U1RR37 186 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 HCRTR1O43613 425 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 ASNA1O43681 348 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 FZD6O60353 706 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 PNMA6AP0CW24 399 aaPredicted RBP13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 CYP11B1P15538 503 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 XRCC4Q13426 336 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 KHDC1Q4VXA5 237 aaKnown RBP13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 ALS2CLQ60I27 953 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 SIAH3Q8IW03 269 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 RAVER1Q8IY67 606 aaKnown RBP13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 ULK2Q8IYT8 1036 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 VWA5B2Q8N398 1253 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 NPWQ8N729 165 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 MSANTD4Q8NCY6 345 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 MYRIPQ8NFW9 859 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 PKD2L2Q9NZM6 624 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 DNPEPQ9ULA0 475 aa13.95□□□□□ -0.18
CHMP2B-205ENST00000494980 A6NNC1 897 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 MAP2K7O14733 419 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 ARHGEF9O43307 516 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 CDK14O94921 469 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 IFNA2P01563 188 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 ACPPP15309 386 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 ITGAXP20702 1163 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 PRDX3P30048 256 aaKnown RBP13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 SCYL2Q6P3W7 929 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 ARSKQ6UWY0 536 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 FAM83HQ6ZRV2 1179 aaPredicted RBP13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 OVCH1Q7RTY7 1134 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 CD163Q86VB7 1156 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 OR4E2Q8NGC2 313 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 RND1Q92730 232 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 GLYATL1Q969I3 302 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 C8orf44Q96CB5 159 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 SEC16BQ96JE7 1060 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 Q96MF0 132 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 ZNF599Q96NL3 588 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 KCTD15Q96SI1 283 aaPredicted RBP13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 CRACR2AQ9BSW2 395 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 MENTQ9BUN1 341 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 KIR3DX1Q9H7L2 352 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 BEX4Q9NWD9 120 aaPredicted RBP13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 IRAK4Q9NWZ3 460 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 FZD10Q9ULW2 581 aa13.94□□□□□ -0.18
CHMP2B-205ENST00000494980 MATN2O00339 956 aa13.93□□□□□ -0.18
CHMP2B-205ENST00000494980 TTI1O43156 1089 aa13.93□□□□□ -0.18
CHMP2B-205ENST00000494980 PHF1O43189 567 aaPredicted RBP13.93□□□□□ -0.18
CHMP2B-205ENST00000494980 HSP90AA1P07900 732 aaKnown RBP13.93□□□□□ -0.18
CHMP2B-205ENST00000494980 CELA2AP08217 269 aa13.93□□□□□ -0.18
CHMP2B-205ENST00000494980 ZSCAN22P10073 491 aaPredicted RBP13.93□□□□□ -0.18
CHMP2B-205ENST00000494980 FDXRP22570 491 aa13.93□□□□□ -0.18
CHMP2B-205ENST00000494980 TMEM211Q6ICI0 200 aa13.93□□□□□ -0.18
CHMP2B-205ENST00000494980 TRIM65Q6PJ69 517 aa13.93□□□□□ -0.18
CHMP2B-205ENST00000494980 CPA5Q8WXQ8 436 aa13.93□□□□□ -0.18
CHMP2B-205ENST00000494980 FAM81BQ96LP2 452 aa13.93□□□□□ -0.18
CHMP2B-205ENST00000494980 FRMD6Q96NE9 622 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms