RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 LKAAEAR1Q8TD35 194 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 LCN9Q8WX39 176 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 USP7Q93009 1102 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 C9orf72Q96LT7 481 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 EBNA1BP2Q99848 306 aaKnown RBP15.53■□□□□ 0.08
LIME1-209ENST00000494776 NAT9Q9BTE0 207 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 HGH1Q9BTY7 390 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 P2RY12Q9H244 342 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 SRMSQ9H3Y6 488 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 INTS10Q9NVR2 710 aaKnown RBP15.53■□□□□ 0.08
LIME1-209ENST00000494776 HRASLS2Q9NWW9 162 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 FAM169AQ9Y6X4 670 aa15.53■□□□□ 0.08
LIME1-209ENST00000494776 ASPMQ8IZT6 3477 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 E5RI56 91 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 H3BMM5 538 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 RAD51CO43502 376 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 C9P02748 559 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 ESR1P03372 595 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 CHRM3P20309 590 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 SLC5A2P31639 672 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 EIF2S3P41091 472 aaKnown RBP15.52■□□□□ 0.08
LIME1-209ENST00000494776 ETV5P41161 510 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 RPL21P46778 160 aaKnown RBP15.52■□□□□ 0.08
LIME1-209ENST00000494776 LEPRP48357 1165 aaKnown RBP15.52■□□□□ 0.08
LIME1-209ENST00000494776 SEPHS1P49903 392 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 CALCOCO2Q13137 446 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 CTBP1Q13363 440 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 CRYMQ14894 314 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 HIF1AQ16665 826 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 MSS51Q4VC12 460 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 SPANXN3Q5MJ09 141 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 HP1BP3Q5SSJ5 553 aaPredicted RBP15.52■□□□□ 0.08
LIME1-209ENST00000494776 CACHD1Q5VU97 1274 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 KCNMB4Q86W47 210 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 LMNTD2Q8IXW0 634 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 SKA2Q8WVK7 121 aaPredicted RBP15.52■□□□□ 0.08
LIME1-209ENST00000494776 KCNE4Q8WWG9 221 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 LPGAT1Q92604 370 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 CFAP36Q96G28 342 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 PWWP2AQ96N64 755 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 TAAR9Q96RI9 348 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 ERP44Q9BS26 406 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 FAM167BQ9BTA0 163 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 RAB33BQ9H082 229 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 CCDC68Q9H2F9 335 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 DPH5Q9H2P9 285 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 TRIT1Q9H3H1 467 aaKnown RBP15.52■□□□□ 0.08
LIME1-209ENST00000494776 OCIAD1Q9NX40 245 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 SLC39A1Q9NY26 324 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.52■□□□□ 0.08
LIME1-209ENST00000494776 EPHA6Q9UF33 1036 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 CDC23Q9UJX2 597 aa15.52■□□□□ 0.08
LIME1-209ENST00000494776 TDRKHQ9Y2W6 561 aaKnown RBP15.52■□□□□ 0.08
LIME1-209ENST00000494776 UTP11Q9Y3A2 253 aaKnown RBP15.52■□□□□ 0.08
LIME1-209ENST00000494776 OR5K3A6NET4 321 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 BHMG1C9JSJ3 638 aaPredicted RBP15.51■□□□□ 0.07
LIME1-209ENST00000494776 TOX3O15405 576 aaPredicted RBP15.51■□□□□ 0.07
LIME1-209ENST00000494776 KDM1AO60341 852 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 TUBB4AP04350 444 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 FGF3P11487 239 aaPredicted RBP15.51■□□□□ 0.07
LIME1-209ENST00000494776 POLR2CP19387 275 aaPredicted RBP15.51■□□□□ 0.07
LIME1-209ENST00000494776 AOAHP28039 575 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 ELK3P41970 407 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 ABRQ12979 859 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 HSP90AA5PQ58FG0 334 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 CTSL3PQ5NE16 218 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 DNTTIP2Q5QJE6 756 aaKnown RBP15.51■□□□□ 0.07
LIME1-209ENST00000494776 CENPUQ71F23 418 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 CLEC14AQ86T13 490 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 DENND6AQ8IWF6 608 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 TBC1D21Q8IYX1 336 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 SLC22A15Q8IZD6 547 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 OR52E1Q8NGJ3 308 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 OR5AR1Q8NGP9 310 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 CFAP61Q8NHU2 1237 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 HNRNPLLQ8WVV9 542 aaKnown RBP15.51■□□□□ 0.07
LIME1-209ENST00000494776 ART4Q93070 314 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 PPANQ9NQ55 473 aaKnown RBP15.51■□□□□ 0.07
LIME1-209ENST00000494776 FBXO6Q9NRD1 293 aaPredicted RBP15.51■□□□□ 0.07
LIME1-209ENST00000494776 IARS2Q9NSE4 1012 aaKnown RBP15.51■□□□□ 0.07
LIME1-209ENST00000494776 ZC3H7BQ9UGR2 993 aaKnown RBP15.51■□□□□ 0.07
LIME1-209ENST00000494776 POLG2Q9UHN1 485 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 CHMP2BQ9UQN3 213 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 PCDHGA7Q9Y5G6 932 aa15.51■□□□□ 0.07
LIME1-209ENST00000494776 GSAPA4D1B5 854 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 KIF2AO00139 706 aaPredicted RBP15.5■□□□□ 0.07
LIME1-209ENST00000494776 NVLO15381 856 aaKnown RBP15.5■□□□□ 0.07
LIME1-209ENST00000494776 KIF1CO43896 1103 aaKnown RBP15.5■□□□□ 0.07
LIME1-209ENST00000494776 PRAMEF10O60809 474 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 NIPSNAP2O75323 286 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 GPC4O75487 556 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 S1PR4O95977 384 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 RPN2P04844 631 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 ANKRD34CP0C6C1 535 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 ERVK-10P10266 1014 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 PKMP14618 531 aaKnown RBP15.5■□□□□ 0.07
LIME1-209ENST00000494776 ACADLP28330 430 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 SLC1A2P43004 574 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 ARL4DP49703 201 aa15.5■□□□□ 0.07
LIME1-209ENST00000494776 ADARP55265 1226 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms