RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 CMTM8Q8IZV2 173 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 LIX1Q8N485 282 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 DTWD1Q8N5C7 304 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 OR2AP1Q8NGE2 309 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 SKA2Q8WVK7 121 aaPredicted RBP10.99□□□□□ -0.65
CHMP3-209ENST00000494623 ZBTB18Q99592 522 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 HTATIP2Q9BUP3 242 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 THUMPD3Q9BV44 507 aaKnown RBP10.99□□□□□ -0.65
CHMP3-209ENST00000494623 TMEM45AQ9NWC5 275 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 VAPAQ9P0L0 249 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 PCDHB3Q9Y5E6 796 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 A0A1W2PRU2 124 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 CLOCKO15516 846 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 FKTNO75072 461 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 SOCS5O75159 536 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 KCNH1O95259 989 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 PCNAP12004 261 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 EPB42P16452 691 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 CALRP27797 417 aaKnown RBP10.99□□□□□ -0.65
CHMP3-209ENST00000494623 MAPK8P45983 427 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 GNPDA1P46926 289 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 DEFB103AP81534 67 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 CPSF6Q16630 551 aaKnown RBP eCLIP10.99□□□□□ -0.65
CHMP3-209ENST00000494623 TTLL9Q3SXZ7 439 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 FAM174BQ3ZCQ3 159 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 GPR33Q49SQ1 333 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 OTUD3Q5T2D3 398 aaPredicted RBP10.99□□□□□ -0.65
CHMP3-209ENST00000494623 LRRC66Q68CR7 880 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 TBPL2Q6SJ96 375 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 SLC39A5Q6ZMH5 540 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 HTR3DQ70Z44 454 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 DET1Q7L5Y6 550 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 FAM217AQ8IXS0 508 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 RGL4Q8IZJ4 473 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 OFCC1Q8IZS5 231 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 KRTCAP2Q8N6L1 136 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 PAPD5Q8NDF8 572 aaKnown RBP10.99□□□□□ -0.65
CHMP3-209ENST00000494623 CLHC1Q8NHS4 586 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 FIBINQ8TAL6 211 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 CFHR5Q9BXR6 569 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 DPY30Q9C005 99 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 FADS3Q9Y5Q0 445 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 SLC28A1O00337 649 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 GMNNO75496 209 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 STK16O75716 305 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 SRCP12931 536 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 MSH3P20585 1137 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 MYF6P23409 242 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 JAK1P23458 1154 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 PCSK6P29122 969 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 RPS9P46781 194 aaKnown RBP10.98□□□□□ -0.65
CHMP3-209ENST00000494623 CSNK1DP48730 415 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 RPIAP49247 311 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 PTSQ03393 145 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 KIAA0040Q15053 153 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 MAPKAPK3Q16644 382 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 ATP13A5Q4VNC0 1218 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 PYCR3Q53H96 274 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 TMEM214Q6NUQ4 689 aaKnown RBP10.98□□□□□ -0.65
CHMP3-209ENST00000494623 CNKSR3Q6P9H4 555 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 DNAJC14Q6Y2X3 702 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-209ENST00000494623 DDX53Q86TM3 631 aaKnown RBP10.98□□□□□ -0.65
CHMP3-209ENST00000494623 DHRSXQ8N5I4 330 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 ITFG1Q8TB96 612 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 SLC13A3Q8WWT9 602 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 FIG4Q92562 907 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 ZNF583Q96ND8 569 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 RNF208Q9H0X6 261 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 LRTM1Q9HBL6 345 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-209ENST00000494623 CD84Q9UIB8 345 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 MAGEL2Q9UJ55 1249 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 TANC1Q9C0D5 1861 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 IFRD1O00458 451 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-209ENST00000494623 MANBAO00462 879 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 GSTA4O15217 222 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 TGM5O43548 720 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 SNAP29O95721 258 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 EBLN1P0CF75 366 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 CDH2P19022 906 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-209ENST00000494623 CCR7P32248 378 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 NSG1P42857 185 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 SNRPD1P62314 119 aaKnown RBP10.98□□□□□ -0.65
CHMP3-209ENST00000494623 HSPA14Q0VDF9 509 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 SPANXN4Q5MJ08 99 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 CBARPQ8N350 705 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-209ENST00000494623 OR10A6Q8NH74 314 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 HM13Q8TCT9 377 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 SCRN2Q96FV2 425 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 HIC2Q96JB3 615 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 COPS8Q99627 209 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 TBCDQ9BTW9 1192 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 BDH2Q9BUT1 245 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 ZDHHC6Q9H6R6 413 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 ARL15Q9NXU5 204 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 SMPD3Q9NY59 655 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-209ENST00000494623 THEGQ9P2T0 379 aa10.98□□□□□ -0.65
CHMP3-209ENST00000494623 PARNO95453 639 aaKnown RBP10.97□□□□□ -0.65
CHMP3-209ENST00000494623 LRG1P02750 347 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 ANXA6P08133 673 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms