RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 AMD1P17707 334 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 MC2RQ01718 297 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 CACNG1Q06432 222 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 ZNF844Q08AG5 666 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 LAMB3Q13751 1172 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 TRIP13Q15645 432 aaPredicted RBP12.89□□□□□ -0.35
ERCC3-209ENST00000494464 KCTD19Q17RG1 926 aaPredicted RBP12.89□□□□□ -0.35
ERCC3-209ENST00000494464 DCAF12Q5T6F0 453 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 KLHL35Q6PF15 583 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 CEACAM20Q6UY09 585 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 PCGF5Q86SE9 256 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 CROCCP2Q86T23 111 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 SERPINA9Q86WD7 417 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 DNAAF3Q8N9W5 541 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 OR52K1Q8NGK4 314 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 ZFPM2Q8WW38 1151 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 ZPBPQ9BS86 351 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 ZNF768Q9H5H4 540 aaKnown RBP12.89□□□□□ -0.35
ERCC3-209ENST00000494464 VPS37BQ9H9H4 285 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 CASS4Q9NQ75 786 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 RAB6BQ9NRW1 208 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 PIH1D1Q9NWS0 290 aaKnown RBP12.89□□□□□ -0.35
ERCC3-209ENST00000494464 PSMD13Q9UNM6 376 aa12.89□□□□□ -0.35
ERCC3-209ENST00000494464 ATMQ13315 3056 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.88□□□□□ -0.35
ERCC3-209ENST00000494464 HMGB1P1B2RPK0 211 aaPredicted RBP12.88□□□□□ -0.35
ERCC3-209ENST00000494464 QSOX1O00391 747 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 CAPN5O15484 640 aaPredicted RBP12.88□□□□□ -0.35
ERCC3-209ENST00000494464 GSTM1P09488 218 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 ETS1P14921 441 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 FOXN2P32314 431 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 LMAN1P49257 510 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 CDKN1CP49918 316 aaPredicted RBP12.88□□□□□ -0.35
ERCC3-209ENST00000494464 ATP1A2P50993 1020 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 GSTM4Q03013 218 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 ACVR1Q04771 509 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 ITIH4Q14624 930 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 SKIDA1Q1XH10 827 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 ZNF658BQ4V348 819 aaPredicted RBP12.88□□□□□ -0.35
ERCC3-209ENST00000494464 ZRANB3Q5FWF4 1079 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 MANEAQ5SRI9 462 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 RNASEH2BQ5TBB1 312 aaKnown RBP12.88□□□□□ -0.35
ERCC3-209ENST00000494464 ANKS6Q68DC2 871 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 C4orf22Q6V702 233 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 PACS1Q6VY07 963 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 PPP1R21Q6ZMI0 780 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 HOOK3Q86VS8 718 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 GLIS1Q8NBF1 620 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 NAT14Q8WUY8 206 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 PEX13Q92968 403 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 WBP1Q96G27 269 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 RMDN2Q96LZ7 410 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 C12orf66Q96MD2 445 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 TGM7Q96PF1 710 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 CCM2Q9BSQ5 444 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 TMEM109Q9BVC6 243 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 WWP1Q9H0M0 922 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 FAM96AQ9H5X1 160 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 COG4Q9H9E3 785 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 TMBIM4Q9HC24 238 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 EIF2B3Q9NR50 452 aaKnown RBP12.88□□□□□ -0.35
ERCC3-209ENST00000494464 IMP3Q9NV31 184 aaKnown RBP12.88□□□□□ -0.35
ERCC3-209ENST00000494464 SEMA5BQ9P283 1151 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 KLHL3Q9UH77 587 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 PIKFYVEQ9Y2I7 2098 aa12.88□□□□□ -0.35
ERCC3-209ENST00000494464 EFSO43281 561 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 RIPK2O43353 540 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 AP2A2O94973 939 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 APRTP07741 180 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 MYZAPP0CAP1 466 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 PRSS56P0CW18 603 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 NSG1P42857 185 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 LEPRP48357 1165 aaKnown RBP12.87□□□□□ -0.35
ERCC3-209ENST00000494464 VPS41P49754 854 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 GPS1Q13098 491 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 PLCL1Q15111 1095 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 DBN1Q16643 649 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 CCDC38Q502W7 563 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 TTMPQ5BVD1 217 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 CEP85LQ5SZL2 805 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 AGBL2Q5U5Z8 902 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 CAPRIN2Q6IMN6 1127 aaKnown RBP12.87□□□□□ -0.35
ERCC3-209ENST00000494464 PCSK4Q6UW60 755 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 PIANPQ8IYJ0 282 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 OR13J1Q8NGT2 312 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 TTC9Q92623 222 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 NKD1Q969G9 470 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 ZDHHC12Q96GR4 267 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 ATP6V1G3Q96LB4 118 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 INSM2Q96T92 566 aaPredicted RBP12.87□□□□□ -0.35
ERCC3-209ENST00000494464 KIR3DX1Q9H7L2 352 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 PSD3Q9NYI0 1048 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 FAM8A1Q9UBU6 413 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 TMEM184BQ9Y519 407 aaPredicted RBP12.87□□□□□ -0.35
ERCC3-209ENST00000494464 HEBP2Q9Y5Z4 205 aa12.87□□□□□ -0.35
ERCC3-209ENST00000494464 CFAP20Q9Y6A4 193 aaKnown RBP12.87□□□□□ -0.35
ERCC3-209ENST00000494464 OR5K3A6NET4 321 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 POLR1CO15160 346 aaPredicted RBP12.86□□□□□ -0.35
ERCC3-209ENST00000494464 RAD1O60671 282 aa12.86□□□□□ -0.35
ERCC3-209ENST00000494464 ZSCAN5DPP0CG00 497 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms