RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ERVK-6Q9BXR3 956 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 IKZF2Q9UKS7 526 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 CNOT6Q9ULM6 557 aaKnown RBP18.86■□□□□ 0.61
COL27A1-207ENST00000494090 DUOX1Q9NRD9 1551 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 SLC7A1P30825 629 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 RAPSNQ13702 412 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 PJA1Q8NG27 643 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 PIGXQ8TBF5 258 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 SLC35C2Q9NQQ7 365 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 RUVBL1Q9Y265 456 aaKnown RBP18.86■□□□□ 0.61
COL27A1-207ENST00000494090 DGKBQ9Y6T7 804 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 RAP2AP10114 183 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 PSMA1P25786 263 aaKnown RBP18.86■□□□□ 0.61
COL27A1-207ENST00000494090 PLEKHG4Q58EX7 1191 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 CLEC20AQ6ZU45 233 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 SATL1Q86VE3 508 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 P2RY8Q86VZ1 359 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 SLC30A8Q8IWU4 369 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 ACDQ96AP0 544 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 OR2AG2A6NM03 316 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 IRAK2O43187 625 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 COL6A1P12109 1028 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 CRYBG2Q8N1P7 616 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 HPS1Q92902 700 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 RFKQ969G6 155 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 WRAP53Q9BUR4 548 aaKnown RBP18.85■□□□□ 0.61
COL27A1-207ENST00000494090 FNIP2Q9P278 1114 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 MAP4K5Q9Y4K4 846 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 AQP12BA6NM10 295 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 MAGEB17A8MXT2 336 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 CBX5P45973 191 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 GMFBP60983 142 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 TXNRD3NBQ6F5E7 133 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 AQP12AQ8IXF9 295 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 COPS7AQ9UBW8 275 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.85■□□□□ 0.61
COL27A1-207ENST00000494090 SNX7Q9UNH6 387 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 ZNF536O15090 1300 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 RPP38P78345 283 aaKnown RBP18.85■□□□□ 0.61
COL27A1-207ENST00000494090 GRB14Q14449 540 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 AHSA2Q719I0 299 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 TLR6Q9Y2C9 796 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 FCF1Q9Y324 198 aaKnown RBP18.85■□□□□ 0.61
COL27A1-207ENST00000494090 CA12O43570 354 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 OR1F1O43749 312 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 CFHP08603 1231 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 GNAZP19086 355 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 ALAS2P22557 587 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 AVPR1BP47901 424 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 RPS6KA3P51812 740 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 ZCCHC12Q6PEW1 402 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 VITQ6UXI7 678 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 TTLQ8NG68 377 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 LPIN3Q9BQK8 851 aa18.85■□□□□ 0.61
COL27A1-207ENST00000494090 ARHGEF33A8MVX0 844 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 CXorf49A8MYA2 514 aaPredicted RBP18.84■□□□□ 0.61
COL27A1-207ENST00000494090 GPR33Q49SQ1 333 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 TMEM220Q6QAJ8 160 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 KCTD8Q6ZWB6 473 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 TMEM192Q8IY95 271 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 CRELD1Q96HD1 420 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 OSBPL2Q9H1P3 480 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 DNAJB9Q9UBS3 223 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 FAM208AQ9UK61 1670 aaKnown RBP18.84■□□□□ 0.61
COL27A1-207ENST00000494090 ITM2AO43736 263 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 H6PDO95479 791 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 GPX6P59796 221 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 RPS14P62263 151 aaKnown RBP18.84■□□□□ 0.61
COL27A1-207ENST00000494090 SLC25A11Q02978 314 aaKnown RBP18.84■□□□□ 0.61
COL27A1-207ENST00000494090 SYPL2Q5VXT5 272 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 NSMCE3Q96MG7 304 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 BCO2Q9BYV7 579 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 TP73O15350 636 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 PLOD3O60568 738 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 IFNA6P05013 189 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 INHAP05111 366 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 ERVK-8P63133 956 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 KCTD13Q8WZ19 329 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 SLC38A3Q99624 504 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 TLX3O43711 291 aaPredicted RBP18.84■□□□□ 0.61
COL27A1-207ENST00000494090 MTTPP55157 894 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 SLC22A18Q96BI1 424 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 GPER1Q99527 375 aa18.84■□□□□ 0.61
COL27A1-207ENST00000494090 DHFRP00374 187 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 SDC2P34741 201 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 RABGGTBP53611 331 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 TMEM44Q2T9K0 475 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 MINDY4Q4G0A6 757 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 LCN1P1Q5VSP4 162 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 ZDHHC21Q8IVQ6 265 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 ASB9Q96DX5 294 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 KLHL32Q96NJ5 620 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 ZNF358Q9NW07 568 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 HCN3Q9P1Z3 774 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 KNDC1Q76NI1 1749 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 IQCF5A8MTL0 148 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 GRIA1P42261 906 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 SLC35G1Q2M3R5 365 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 FAM174BQ3ZCQ3 159 aa18.83■□□□□ 0.61
COL27A1-207ENST00000494090 EIPR1Q53HC9 387 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms