RNA–Protein interactions for RNA: ENST00000494058.5

SKIV2L-215, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 867 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-215	ENST00000494058	IFI44	Q8TCB0	444 aa		12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	ANKRD7	Q92527	254 aa		12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	MRRF	Q96E11	262 aa	Known RBP	12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	AHCYL2	Q96HN2	611 aa	Known RBP	12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	CABS1	Q96KC9	395 aa		12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	PKNOX2	Q96KN3	472 aa		12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	FERD3L	Q96RJ6	166 aa		12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	MCMBP	Q9BTE3	642 aa		12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	TRIM54	Q9BYV2	358 aa		12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	GPAM	Q9HCL2	828 aa		12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	SLC40A1	Q9NP59	571 aa		12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.84	□□□□□ -0.35
SKIV2L-215	ENST00000494058	TRBV23OR9-2	A0A075B6M9	112 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	CCDC189	A1A4V9	331 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	LILRA5	A6NI73	299 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	ZNF839	A8K0R7	811 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	TM4SF5	O14894	197 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	CTIF	O43310	598 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	TCEA3	O75764	348 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	C1QA	P02745	245 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	C8G	P07360	202 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	NUDT17	P0C025	328 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	BRAF	P15056	766 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	PDHA2	P29803	388 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	HSD17B3	P37058	310 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	HSD17B2	P37059	387 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	SLC19A1	P41440	591 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	SERPINB8	P50452	374 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	NOVA1	P51513	510 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	CDKN2D	P55273	166 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	RAB10	P61026	200 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	UBE2I	P63279	158 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	SP140	Q13342	867 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	GBX1	Q14549	363 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	PLCL1	Q15111	1095 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	RBM20	Q5T481	1227 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	ADGRD1	Q6QNK2	874 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	MICALCL	Q6ZW33	695 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	EFL1	Q7Z2Z2	1120 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	TBC1D1	Q86TI0	1168 aa	Predicted RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	RIBC1	Q8N443	379 aa	Predicted RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	ACVR1C	Q8NER5	493 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	DEFB124	Q8NES8	71 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	OR5K2	Q8NHB8	316 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	UHMK1	Q8TAS1	419 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	CD200R1	Q8TD46	325 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	NAT14	Q8WUY8	206 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	RAD51AP1	Q96B01	352 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	PDLIM5	Q96HC4	596 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	TSNARE1	Q96NA8	513 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	CAMK1G	Q96NX5	476 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	INSM2	Q96T92	566 aa	Predicted RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	RAB11FIP5	Q9BXF6	653 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	KCNK4	Q9NYG8	393 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	SLC17A6	Q9P2U8	582 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	LNPEP	Q9UIQ6	1025 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	CDYL	Q9Y232	598 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	WDR37	Q9Y2I8	494 aa		12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058	MTO1	Q9Y2Z2	717 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-215	ENST00000494058		A0A087X1B8	175 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	FAM221B	A6H8Z2	402 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	OR52A4P	A6NMU1	304 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	TMX2-CTNND1	H3BSU7	103 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	MATN2	O00339	956 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	SLC16A5	O15375	505 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	DUX1	O43812	170 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	CDH16	O75309	829 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	RFPL3	O75679	317 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	MATN4	O95460	622 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	MPO	P05164	745 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	HIST1H2AD	P20671	130 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	CYP2A7	P20853	494 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	ACADL	P28330	430 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	TYK2	P29597	1187 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	ALDH4A1	P30038	563 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	MAZ	P56270	477 aa	Known RBP	12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	TAS2R39	P59534	338 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	ATP6V0D1	P61421	351 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	ABR	Q12979	859 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	NR1D2	Q14995	579 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	RASA2	Q15283	850 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	MROH9	Q5TGP6	573 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	KLC3	Q6P597	504 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	PAQR3	Q6TCH7	311 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	TMEM26	Q6ZUK4	368 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	ZNF438	Q7Z4V0	828 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	TDRP	Q86YL5	185 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	DCUN1D3	Q8IWE4	304 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	LKAAEAR1	Q8TD35	194 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	MCOLN3	Q8TDD5	553 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	FAM136A	Q96C01	138 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	HIST1H2AH	Q96KK5	128 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	RMDN2	Q96LZ7	410 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	HIST1H2AJ	Q99878	128 aa		12.82	□□□□□ -0.36
SKIV2L-215	ENST00000494058	CCDC3	Q9BQI4	270 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms