RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 CAPNS1P04632 268 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 ZFP36L2P47974 494 aaKnown RBP10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 HTR6P50406 440 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 NME5P56597 212 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 NR6A1Q15406 480 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 ZFAND4Q86XD8 727 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 RASGRP3Q8IV61 690 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 ADCY4Q8NFM4 1077 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 LRRC3BQ96PB8 259 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 ARL15Q9NXU5 204 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 CD84Q9UIB8 345 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 RIMS3Q9UJD0 308 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 CCL27Q9Y4X3 112 aa10.58□□□□□ -0.72
PHACTR4-204ENST00000493669 CCDC154A6NI56 674 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 JAK1P23458 1154 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 PEX2P28328 305 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 KCNC3Q14003 757 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 DUSP6Q16828 381 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 LRRC73Q5JTD7 316 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 LAYNQ6UX15 382 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 Q6ZVL8 140 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 SPRED2Q7Z698 418 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 TMIEQ8NEW7 156 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 NAT14Q8WUY8 206 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 BTN2A2Q8WVV5 523 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 ASZ1Q8WWH4 475 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 USP7Q93009 1102 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 LMAN2LQ9H0V9 348 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 ARNTLO00327 626 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 TCN1P20061 433 aaPredicted RBP10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 ABRAXAS2Q15018 415 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 C6orf10Q5SRN2 563 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 SCIMPQ6UWF3 145 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 CYP2U1Q7Z449 544 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 DHFR2Q86XF0 187 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 DPP10Q8N608 796 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 SMARCD2Q92925 531 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 RSPRY1Q96DX4 576 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 ASB16Q96NS5 453 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 EFHD1Q9BUP0 239 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 RIOK2Q9BVS4 552 aaKnown RBP10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 ANKRD12Q6UB98 2062 aa10.57□□□□□ -0.72
PHACTR4-204ENST00000493669 EDDM13A0A1B0GTR0 161 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 AQP12BA6NM10 295 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ULK1O75385 1050 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 SLCO2B1O94956 709 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 CLDN9O95484 217 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 KRT6AP02538 564 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 KRT6BP04259 564 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 CA3P07451 260 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ELFN1P0C7U0 828 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 MYOGP15173 224 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 SLC6A2P23975 617 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 SLC7A1P30825 629 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 MSX2P35548 267 aaPredicted RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ETV3P41162 512 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 SLC6A12P48065 614 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 KRT6CP48668 564 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 UFM1P61960 85 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 HSPA14Q0VDF9 509 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 NFYCQ13952 458 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 PDGFRLQ15198 375 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 TLR1Q15399 786 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 AP5B1Q2VPB7 878 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 TCEAL5Q5H9L2 206 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 LPCAT4Q643R3 524 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 LIPIQ6XZB0 460 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ZNF765Q7L2R6 523 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 C12orf40Q86WS4 652 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 APLFQ8IW19 511 aaPredicted RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 NPAS3Q8IXF0 933 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 AQP12AQ8IXF9 295 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 SLC15A3Q8IY34 581 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 DCBLD1Q8N8Z6 715 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 FAM156AQ8NDB6 213 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 PROKR1Q8TCW9 393 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 MCOLN3Q8TDD5 553 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 SCAMP4Q969E2 229 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 C1orf50Q9BV19 199 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 EPHX3Q9H6B9 360 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 TRPV4Q9HBA0 871 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 DZANK1Q9NVP4 752 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 EIF3LQ9Y262 564 aaKnown RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 DTNAQ9Y4J8 743 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 PCDHA9Q9Y5H5 950 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 MANBAO00462 879 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 NME4O00746 187 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 SGTAO43765 313 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 DNAJA2O60884 412 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ITGB7P26010 798 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ZNF33BQ06732 778 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ELP6Q0PNE2 266 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 CYP20A1Q6UW02 462 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 PARS2Q7L3T8 475 aaKnown RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 GLB1L3Q8NCI6 653 aaPredicted RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ICA1LQ8NDH6 482 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 MYLIPQ8WY64 445 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 OR8D1Q8WZ84 308 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 GLMNQ92990 594 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 GLYATL1Q969I3 302 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms