RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SERPINA9Q86WD7 417 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 ADGRF3Q8IZF5 1079 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 SYCE1Q8N0S2 351 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 RNF10Q8N5U6 811 aaKnown RBP8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 CLDN19Q8N6F1 224 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 OR4E2Q8NGC2 313 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 FLVCR1-AS1Q8TAF5 88 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 ADAMTS17Q8TE56 1095 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 THAP4Q8WY91 577 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 DCUN1D1Q96GG9 259 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 ELMO2Q96JJ3 720 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 DNAJC1Q96KC8 554 aaKnown RBP8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 PPM1MQ96MI6 270 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 EPN3Q9H201 632 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 FAM96AQ9H5X1 160 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 COG4Q9H9E3 785 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 ENAMQ9NRM1 1142 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 IMPACTQ9P2X3 320 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 LNPEPQ9UIQ6 1025 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 CRLS1Q9UJA2 301 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 POLHQ9Y253 713 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 SHANK1Q9Y566 2161 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 COL12A1Q99715 3063 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 SPTAN1Q13813 2472 aaKnown RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 SPTBN1Q01082 2364 aaKnown RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 RELNP78509 3460 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 SLC5A10A0PJK1 596 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 PIPSLA2A3N6 862 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 GOLGA6L9A6NEM1 432 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 SLC9B1P1A6NJY1 282 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 BHMG1C9JSJ3 638 aaPredicted RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 K7EM74 188 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 CCL22O00626 93 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 LIN7AO14910 233 aaPredicted RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 CPNE3O75131 537 aaKnown RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 CEACAM4O75871 244 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 NTRK1P04629 796 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 RAB40ALP0C0E4 278 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 TPH1P17752 444 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 PBLDP30039 288 aaPredicted RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 CDC25BP30305 580 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 FOXN2P32314 431 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 GABRA4P48169 554 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 TMPRSS15P98073 1019 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 PLOD1Q02809 727 aaPredicted RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 KIF5AQ12840 1032 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 ABRQ12979 859 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 GPS2Q13227 327 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 SEMA5AQ13591 1074 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 SEPT6Q14141 434 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 ERV3-1Q14264 604 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 ITIH4Q14624 930 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 PLCL1Q15111 1095 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 GPR19Q15760 415 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 SKIDA1Q1XH10 827 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 LACTB2Q53H82 288 aaPredicted RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 TMTC4Q5T4D3 741 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 ZNF385CQ66K41 422 aaPredicted RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 LCN10Q6JVE6 187 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 FAM199XQ6PEV8 388 aaPredicted RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 ARHGEF18Q6ZSZ5 1173 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 MICALCLQ6ZW33 695 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 SYVN1Q86TM6 617 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 LINC00523Q86TU6 105 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 TMEM135Q86UB9 458 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 PTRH1Q86Y79 214 aaKnown RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 DSELQ8IZU8 1212 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 UBL4BQ8N7F7 174 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 OR13J1Q8NGT2 312 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 LCN9Q8WX39 176 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 PEX13Q92968 403 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 TRAPPC9Q96Q05 1148 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 RANBP9Q96S59 729 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 RUFY1Q96T51 708 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 NRTNQ99748 197 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 TMEM121Q9BTD3 319 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 FRMD8P1Q9BZ68 369 aaPredicted RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 TRIM4Q9C037 500 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 SRMSQ9H3Y6 488 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 ACTL8Q9H568 366 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 VPS37BQ9H9H4 285 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 ZNF71Q9NQZ8 489 aaPredicted RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 TLK1Q9UKI8 766 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 PACSIN2Q9UNF0 486 aaPredicted RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 PCDHGA9Q9Y5G4 932 aaKnown RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 TNRC6AQ8NDV7 1962 aaKnown RBP8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 UNC79Q9P2D8 2635 aa8.13□□□□□ -1.11
SMARCB1-207ENST00000491967 HIVEP3Q5T1R4 2406 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 PCM1Q15154 2024 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 CNTRLQ7Z7A1 2325 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 MACROD2A1Z1Q3 448 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 MEN1O00255 615 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 QSOX1O00391 747 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 BTN3A1O00481 513 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 ARHGAP6O43182 974 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 LIASO43766 372 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 KATNA1O75449 491 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 RFPL1O75677 317 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 SCRG1O75711 98 aa8.12□□□□□ -1.11
SMARCB1-207ENST00000491967 FTCDO95954 541 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms