RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 NBPF19A0A087WUL8 3843 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 SEC16AO15027 2179 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 USP9YO00507 2555 aaPredicted RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 GSAPA4D1B5 854 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 GRID2IPA4D2P6 1211 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 C2orf74A8MZ97 194 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 AP3B1O00203 1094 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 GPR39O43194 453 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 LDB2O43679 373 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 AP2A1O95782 977 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 IGHEP01854 428 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 POLBP06746 335 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 FOLR1P15328 257 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 PSMA3P25788 255 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 VARSP26640 1264 aaKnown RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 SHMT2P34897 504 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 KPNA2P52292 529 aaKnown RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 CDH17Q12864 832 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 MSLNQ13421 630 aaPredicted RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 SEMA5AQ13591 1074 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 PTPRCAPQ14761 206 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 FAM182AQ5T1J6 154 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 SEL1L2Q5TEA6 688 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 KCTD11Q693B1 232 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 DENND5AQ6IQ26 1287 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 PACS1Q6VY07 963 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 CERS6Q6ZMG9 384 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 ZNF517Q6ZMY9 492 aaPredicted RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 NLRP9Q7RTR0 991 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 TAS2R42Q7RTR8 314 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 AMIGO1Q86WK6 493 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 PTRH1Q86Y79 214 aaKnown RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 GPR135Q8IZ08 494 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 RNF10Q8N5U6 811 aaKnown RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 OR4E2Q8NGC2 313 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 OR13C4Q8NGS5 318 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 DENND1AQ8TEH3 1009 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 CT55Q8WUE5 264 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 N4BP2L2Q92802 583 aaPredicted RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 PEX13Q92968 403 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 MR1Q95460 341 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 CDKN2AIPNLQ96HQ2 116 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 DNAJC1Q96KC8 554 aaKnown RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 RMDN2Q96LZ7 410 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 IP6K3Q96PC2 410 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 PSMG3-AS1Q96PY0 264 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 FERD3LQ96RJ6 166 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 APOL2Q9BQE5 337 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 DHRS4Q9BTZ2 278 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 PITPNM3Q9BZ71 974 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 TSGA10Q9BZW7 698 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 CHRNA10Q9GZZ6 450 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 EPN3Q9H201 632 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 RIMKLBQ9ULI2 386 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 FARSAQ9Y285 508 aaKnown RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 PCDHGA9Q9Y5G4 932 aaKnown RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 MRFAP1Q9Y605 127 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 MRPS18BQ9Y676 258 aaKnown RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 CFAP20Q9Y6A4 193 aaKnown RBP8.51□□□□□ -1.05
NUP50-217ENST00000491860 AP1M2Q9Y6Q5 423 aa8.51□□□□□ -1.05
NUP50-217ENST00000491860 HEATR9A2RTY3 570 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 RCCD1A6NED2 376 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 C9J4A7 227 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 E7EQ34 232 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 MEN1O00255 615 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 SGTAO43765 313 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 RPN2P04844 631 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 OR56A5P0C7T3 313 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 POLR2CP19387 275 aaPredicted RBP8.5□□□□□ -1.05
NUP50-217ENST00000491860 CYP2A7P20853 494 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 AGXTP21549 392 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 F8A1P23610 371 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 PRDX3P30048 256 aaKnown RBP8.5□□□□□ -1.05
NUP50-217ENST00000491860 FDFT1P37268 417 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 PREPP48147 710 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 LMAN1P49257 510 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 RRADP55042 308 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 ITGA1P56199 1179 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 PPP1CAP62136 330 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 TMPRSS15P98073 1019 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 KLF1Q13351 362 aaPredicted RBP8.5□□□□□ -1.05
NUP50-217ENST00000491860 BOP1Q14137 746 aaKnown RBP8.5□□□□□ -1.05
NUP50-217ENST00000491860 KCNAB1Q14722 419 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 SYTL3Q4VX76 610 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 AARS2Q5JTZ9 985 aaKnown RBP8.5□□□□□ -1.05
NUP50-217ENST00000491860 DUS1LQ6P1R4 473 aaKnown RBP8.5□□□□□ -1.05
NUP50-217ENST00000491860 C4orf22Q6V702 233 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 RAD9BQ6WBX8 426 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 ASB18Q6ZVZ8 466 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 SERPINA9Q86WD7 417 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 TBC1D21Q8IYX1 336 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 DSELQ8IZU8 1212 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 DNAAF3Q8N9W5 541 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 FAM71DQ8N9W8 422 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 SPDYE1Q8NFV5 336 aaPredicted RBP8.5□□□□□ -1.05
NUP50-217ENST00000491860 OR52E1Q8NGJ3 308 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 SLC35B2Q8TB61 432 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 ALG3Q92685 438 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 TFGQ92734 400 aaPredicted RBP8.5□□□□□ -1.05
NUP50-217ENST00000491860 CLIP3Q96DZ5 547 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms