RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 MICALCLQ6ZW33 695 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 TIPARPQ7Z3E1 657 aaKnown RBP16.98■□□□□ 0.31
SEC13-218ENST00000490283 HOOK3Q86VS8 718 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 EXTL1Q92935 676 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 SGSM3Q96HU1 749 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 SLC45A3Q96JT2 553 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 HGH1Q9BTY7 390 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 FANCEQ9HB96 536 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 CATSPERZQ9NTU4 200 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 ASF1AQ9Y294 204 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 RPS6KL1Q9Y6S9 549 aa16.98■□□□□ 0.31
SEC13-218ENST00000490283 LOC101059948A0A1B0GTJ6 334 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 SPAG6O75602 509 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 SFTPCP11686 197 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 WT1P19544 449 aaPredicted RBP16.97■□□□□ 0.31
SEC13-218ENST00000490283 TPSB2P20231 275 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 STAT5AP42229 794 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 ARCN1P48444 511 aaKnown RBP16.97■□□□□ 0.31
SEC13-218ENST00000490283 TTPAP49638 278 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 CYP4F2P78329 520 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 TPSAB1Q15661 275 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 ZNF658BQ4V348 819 aaPredicted RBP16.97■□□□□ 0.31
SEC13-218ENST00000490283 AMIGO1Q86WK6 493 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 UNC5BQ8IZJ1 945 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 OTUD6BQ8N6M0 293 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 PRELID2Q8N945 189 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 GALNT6Q8NCL4 622 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 PHC3Q8NDX5 983 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 OR52E1Q8NGJ3 308 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 OR8K5Q8NH50 307 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 ZNF778Q96MU6 729 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 CATSPER2Q96P56 530 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 FCRL4Q96PJ5 515 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 SLC12A9Q9BXP2 914 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 TFB2MQ9H5Q4 396 aaKnown RBP16.97■□□□□ 0.31
SEC13-218ENST00000490283 CHRAC1Q9NRG0 131 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 FGF21Q9NSA1 209 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 POLG2Q9UHN1 485 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 POMT2Q9UKY4 750 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 PRSS21Q9Y6M0 314 aa16.97■□□□□ 0.31
SEC13-218ENST00000490283 C2orf74A8MZ97 194 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 PFDN6O15212 129 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 OR1I1O60431 355 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 C1QL1O75973 258 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 EBLN1P0CF75 366 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 FOLR1P15328 257 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 KPNA2P52292 529 aaKnown RBP16.96■□□□□ 0.31
SEC13-218ENST00000490283 TUBB4BP68371 445 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 PRKG2Q13237 762 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 TUBB2AQ13885 445 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 KCNAB1Q14722 419 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 TMED2Q15363 201 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 TRIP13Q15645 432 aaPredicted RBP16.96■□□□□ 0.31
SEC13-218ENST00000490283 TBR1Q16650 682 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 BORAQ6PGQ7 559 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 ZNF843Q8N446 348 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 D2HGDHQ8N465 521 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 GSDMBQ8TAX9 411 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 MAGOHBQ96A72 148 aaKnown RBP16.96■□□□□ 0.31
SEC13-218ENST00000490283 TUBB2BQ9BVA1 445 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 C1GALT1Q9NS00 363 aa16.96■□□□□ 0.31
SEC13-218ENST00000490283 TTC7AQ9ULT0 858 aaPredicted RBP16.96■□□□□ 0.31
SEC13-218ENST00000490283 GOLGA6L10A0A0M3HER8 536 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 PGRMC1O00264 195 aaKnown RBP16.95■□□□□ 0.3
SEC13-218ENST00000490283 CD3EAPO15446 510 aaKnown RBP16.95■□□□□ 0.3
SEC13-218ENST00000490283 KIF5CO60282 957 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 APOA4P06727 396 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 ZNF28P17035 718 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 SHMT2P34897 504 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 DLSTP36957 453 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 VPS41P49754 854 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 CRADDP78560 199 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 GPS1Q13098 491 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 PTRHD1Q6GMV3 140 aaKnown RBP16.95■□□□□ 0.3
SEC13-218ENST00000490283 LRRC8BQ6P9F7 803 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 ZNF534Q76KX8 674 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 ZNF605Q86T29 641 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 TBC1D21Q8IYX1 336 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 MPP5Q8N3R9 675 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 RASGEF1CQ8N431 466 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 STARD8Q92502 1023 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 KCND3Q9UK17 655 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 PADI1Q9ULC6 663 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 PCDHB3Q9Y5E6 796 aa16.95■□□□□ 0.3
SEC13-218ENST00000490283 LOC400499M0QZD8 3231 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.94■□□□□ 0.3
SEC13-218ENST00000490283 SLC5A10A0PJK1 596 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 BTN3A1O00481 513 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 PRMT5O14744 637 aaPredicted RBP16.94■□□□□ 0.3
SEC13-218ENST00000490283 NDUFS3O75489 264 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 KRT14P02533 472 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 RPN2P04844 631 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 PRKAR1AP10644 381 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 ITGB6P18564 788 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 PAMP19021 973 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 TCN2P20062 427 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 MGAT1P26572 445 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 PRDX3P30048 256 aaKnown RBP16.94■□□□□ 0.3
SEC13-218ENST00000490283 TERF1P54274 439 aa16.94■□□□□ 0.3
SEC13-218ENST00000490283 HSPA14Q0VDF9 509 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms