RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ZNF749O43361 778 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 SRP72O76094 671 aaKnown RBP16.46■□□□□ 0.23
TOP3B-217ENST00000489581 AGTP01019 485 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 PVRP15151 417 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 CDKN2BP42772 138 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 MPP3Q13368 585 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 TFDP2Q14188 446 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 VWA5B1Q5TIE3 1220 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 OR4K2Q8NGD2 314 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 LINC00615Q96LM1 132 aaPredicted RBP16.46■□□□□ 0.23
TOP3B-217ENST00000489581 TRAPPC9Q96Q05 1148 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 RANBP9Q96S59 729 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 CCM2Q9BSQ5 444 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 FSD1LQ9BXM9 530 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 IFNKQ9P0W0 207 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 C5AR2Q9P296 337 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 FKBPLQ9UIM3 349 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 B3GNT3Q9Y2A9 372 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 HEBP2Q9Y5Z4 205 aa16.46■□□□□ 0.23
TOP3B-217ENST00000489581 CCDC66A2RUB6 948 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 E7EQ34 232 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 MATN2O00339 956 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 BTN3A1O00481 513 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 MAP3K7O43318 606 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 LDB2O43679 373 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 AKR1B10O60218 316 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 PYGMP11217 842 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 AGXTP21549 392 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 MLIPQ5VWP3 458 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 PHC3Q8NDX5 983 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 HAUS1Q96CS2 278 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 DCUN1D1Q96GG9 259 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 RBM41Q96IZ5 413 aaKnown RBP16.45■□□□□ 0.22
TOP3B-217ENST00000489581 C5orf34Q96MH7 638 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 RSPH14Q9UHP6 348 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 CRLS1Q9UJA2 301 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 SLC5A6Q9Y289 635 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 PADI2Q9Y2J8 665 aa16.45■□□□□ 0.22
TOP3B-217ENST00000489581 ANKUB1A6NFN9 424 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 C2orf81A6NN90 581 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 MASP2O00187 686 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 KLF7O75840 302 aaPredicted RBP16.44■□□□□ 0.22
TOP3B-217ENST00000489581 MSL3P1P0C860 447 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 ANP32AP39687 249 aaKnown RBP16.44■□□□□ 0.22
TOP3B-217ENST00000489581 SSPNQ14714 243 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 TAF1AQ15573 450 aaPredicted RBP16.44■□□□□ 0.22
TOP3B-217ENST00000489581 ZRANB3Q5FWF4 1079 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 ZNF385CQ66K41 422 aaPredicted RBP16.44■□□□□ 0.22
TOP3B-217ENST00000489581 CDHR3Q6ZTQ4 885 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 MRGPREQ86SM8 312 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 RHOT2Q8IXI1 618 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 OR52E1Q8NGJ3 308 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 HM13Q8TCT9 377 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 P3H4Q92791 437 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 VAT1Q99536 393 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 DPH2Q9BQC3 489 aaPredicted RBP16.44■□□□□ 0.22
TOP3B-217ENST00000489581 DHRS4Q9BTZ2 278 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 FICDQ9BVA6 458 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 PITPNM3Q9BZ71 974 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 FAM96AQ9H5X1 160 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 XKR8Q9H6D3 395 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 SPTLC3Q9NUV7 552 aa16.44■□□□□ 0.22
TOP3B-217ENST00000489581 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.44■□□□□ 0.222e-13■■□□□ 12.3
TOP3B-217ENST00000489581 SPOPO43791 374 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 HBQ1P09105 142 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 CBSLP0DN79 551 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 RALBP11234 206 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 COMTP21964 271 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 CBSP35520 551 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 SLC1A1P43005 524 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 PRLHRP49683 370 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 XIAPP98170 497 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 PRKG2Q13237 762 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 OLIG2Q13516 323 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 TAZQ16635 292 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 C1orf189Q5VU69 101 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 LYPLAL1Q5VWZ2 237 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 SPOCD1Q6ZMY3 1216 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 GPR135Q8IZ08 494 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 GALNT16Q8N428 558 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 CLEC1AQ8NC01 280 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 OR8K1Q8NGG5 319 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 OR13C4Q8NGS5 318 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 N4BP2L2Q92802 583 aaPredicted RBP16.43■□□□□ 0.22
TOP3B-217ENST00000489581 FER1L6-AS2Q96M78 137 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 APOL2Q9BQE5 337 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 ILKAPQ9H0C8 392 aaPredicted RBP16.43■□□□□ 0.22
TOP3B-217ENST00000489581 ZNF552Q9H707 407 aaPredicted RBP16.43■□□□□ 0.22
TOP3B-217ENST00000489581 C10orf88Q9H8K7 445 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 GPN3Q9UHW5 284 aaPredicted RBP16.43■□□□□ 0.22
TOP3B-217ENST00000489581 PTRH2Q9Y3E5 179 aaKnown RBP16.43■□□□□ 0.22
TOP3B-217ENST00000489581 COPG1Q9Y678 874 aaKnown RBP16.43■□□□□ 0.22
TOP3B-217ENST00000489581 CROCCQ5TZA2 2017 aa16.43■□□□□ 0.22
TOP3B-217ENST00000489581 C17orf113A0A1B0GUU1 675 aa16.42■□□□□ 0.22
TOP3B-217ENST00000489581 C2orf74A8MZ97 194 aa16.42■□□□□ 0.22
TOP3B-217ENST00000489581 IFRD1O00458 451 aaPredicted RBP16.42■□□□□ 0.22
TOP3B-217ENST00000489581 ATP1B2P14415 290 aaPredicted RBP16.42■□□□□ 0.22
TOP3B-217ENST00000489581 PDHA2P29803 388 aa16.42■□□□□ 0.22
TOP3B-217ENST00000489581 HADHAP40939 763 aa16.42■□□□□ 0.22
TOP3B-217ENST00000489581 GLRBP48167 497 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms