RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 GORASP1Q9BQQ3 440 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 VPS37BQ9H9H4 285 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 GPR83Q9NYM4 423 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 FKBPLQ9UIM3 349 aa9.1□□□□□ -0.95
SNX17-207ENST00000489402 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNX17-207ENST00000489402 CELSR2Q9HCU4 2923 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 C17orf113A0A1B0GUU1 675 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 CCDC66A2RUB6 948 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 A6NL46 340 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 C2orf74A8MZ97 194 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 E7EQ34 232 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 ZNF185O15231 689 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 MFAP3LO75121 409 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 STK10O94804 968 aaKnown RBP9.09□□□□□ -0.95
SNX17-207ENST00000489402 LCA5LO95447 670 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 AGTP01019 485 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 HBQ1P09105 142 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 RORAP35398 523 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 HADHAP40939 763 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 ITGA1P56199 1179 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 ATP1A4Q13733 1029 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 NCF4Q15080 339 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 KYNUQ16719 465 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 SLC6A19Q695T7 634 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 SARM1Q6SZW1 724 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 FAM198BQ6UWH4 519 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 DAAM2Q86T65 1068 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 HOOK3Q86VS8 718 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 KATNAL2Q8IYT4 538 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 GPR135Q8IZ08 494 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 NXPE1Q8N323 547 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 LILRA3Q8N6C8 439 aaPredicted RBP9.09□□□□□ -0.95
SNX17-207ENST00000489402 FDCSPQ8NFU4 85 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 OR1L3Q8NH93 324 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 PNPLA2Q96AD5 504 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 SGSM3Q96HU1 749 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 IP6K3Q96PC2 410 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 PPP1R2P1Q96PQ5 205 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 COPS8Q99627 209 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 C17orf62Q9BQA9 187 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 DHRS4Q9BTZ2 278 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 NUDT9Q9BW91 350 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 MFRPQ9BY79 579 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 CASS4Q9NQ75 786 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 PCMTD2Q9NV79 361 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 LUZP4Q9P127 313 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 AAR2Q9Y312 384 aaKnown RBP9.09□□□□□ -0.95
SNX17-207ENST00000489402 MED13Q9UHV7 2174 aa9.09□□□□□ -0.95
SNX17-207ENST00000489402 SHANK1Q9Y566 2161 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 MACROD2A1Z1Q3 448 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 APOC4-APOC2K7ER74 178 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 BTN3A1O00481 513 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 SGTAO43765 313 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 KLHL41O60662 606 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 SEMA7AO75326 666 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 DDAH2O95865 285 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 APOC2P02655 101 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 ALPPP05187 535 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 ATP1B2P14415 290 aaPredicted RBP9.08□□□□□ -0.96
SNX17-207ENST00000489402 ST6GAL1P15907 406 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 CTNNA2P26232 953 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 RBL1P28749 1068 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 PRDX3P30048 256 aaKnown RBP9.08□□□□□ -0.96
SNX17-207ENST00000489402 CD151P48509 253 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 MARCKSL1P49006 195 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 LMAN1P49257 510 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 HADHBP55084 474 aaKnown RBP9.08□□□□□ -0.96
SNX17-207ENST00000489402 TMPRSS15P98073 1019 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 XIAPP98170 497 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 PTCHD3Q3KNS1 767 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 PRR30Q53SZ7 412 aaPredicted RBP9.08□□□□□ -0.96
SNX17-207ENST00000489402 VWA5B1Q5TIE3 1220 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 BBS12Q6ZW61 710 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 SNX20Q7Z614 316 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 AMIGO1Q86WK6 493 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 CNGA4Q8IV77 575 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 CDKL3Q8IVW4 592 aaPredicted RBP9.08□□□□□ -0.96
SNX17-207ENST00000489402 VSTM4Q8IW00 320 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 IQCKQ8N0W5 287 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 ZBTB2Q8N680 514 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 GLIS1Q8NBF1 620 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 CLEC1AQ8NC01 280 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 OR52E1Q8NGJ3 308 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 OR13C4Q8NGS5 318 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 PRR7Q8TB68 274 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 SMAD5Q99717 465 aaKnown RBP9.08□□□□□ -0.96
SNX17-207ENST00000489402 C19orf43Q9BQ61 176 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 APOL2Q9BQE5 337 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 PITPNM3Q9BZ71 974 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 TFB2MQ9H5Q4 396 aaKnown RBP9.08□□□□□ -0.96
SNX17-207ENST00000489402 FAM96AQ9H5X1 160 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 MVB12BQ9H7P6 319 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 COG4Q9H9E3 785 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 C5AR2Q9P296 337 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 GPN3Q9UHW5 284 aaPredicted RBP9.08□□□□□ -0.96
SNX17-207ENST00000489402 ALG6Q9Y672 507 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 ESPL1Q14674 2120 aa9.08□□□□□ -0.96
SNX17-207ENST00000489402 A1L4Q6 167 aa9.07□□□□□ -0.96
SNX17-207ENST00000489402 AGAP14A8MT82 685 aa9.07□□□□□ -0.96
SNX17-207ENST00000489402 TCP11X1B4DZS4 312 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms