RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 DENND2DQ9H6A0 471 aaPredicted RBP6.54□□□□□ -1.36
PDCD4-209ENST00000489049 ZNF385DQ9H6B1 395 aa6.54□□□□□ -1.36
PDCD4-209ENST00000489049 ALG9Q9H6U8 611 aa6.54□□□□□ -1.36
PDCD4-209ENST00000489049 EBF2Q9HAK2 575 aa6.54□□□□□ -1.36
PDCD4-209ENST00000489049 KCTD5Q9NXV2 234 aa6.54□□□□□ -1.36
PDCD4-209ENST00000489049 OBP2AQ9NY56 170 aa6.54□□□□□ -1.36
PDCD4-209ENST00000489049 NUDT4Q9NZJ9 180 aa6.54□□□□□ -1.36
PDCD4-209ENST00000489049 STX18Q9P2W9 335 aaKnown RBP6.54□□□□□ -1.36
PDCD4-209ENST00000489049 DKK3Q9UBP4 350 aa6.54□□□□□ -1.36
PDCD4-209ENST00000489049 ZDHHC2Q9UIJ5 367 aa6.54□□□□□ -1.36
PDCD4-209ENST00000489049 CRYL1Q9Y2S2 319 aa6.54□□□□□ -1.36
PDCD4-209ENST00000489049 KCTD3Q9Y597 815 aa6.54□□□□□ -1.36
PDCD4-209ENST00000489049 UBA6A0AVT1 1052 aaPredicted RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 TSPAN11A1L157 253 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 IFRD1O00458 451 aaPredicted RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SDHDO14521 159 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 HGSO14964 777 aaPredicted RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 AURKAO14965 403 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 AZIN1O14977 448 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 UBDO15205 165 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 RAD51BO15315 384 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 HOXC11O43248 304 aaPredicted RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 DCXO43602 365 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SNX2O60749 519 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SUPT7LO94864 414 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 AP2A2O94973 939 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 NPPAP01160 153 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 RHOP08100 348 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 PDHA1P08559 390 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ENO2P09104 434 aaPredicted RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 GSTM1P09488 218 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ACRP10323 421 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 HSPA8P11142 646 aaKnown RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 PABPC1P11940 636 aaKnown RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 GFAPP14136 432 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 IDO1P14902 403 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 POLR2EP19388 210 aaKnown RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 MSH3P20585 1137 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ITGB8P26012 769 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ARRB2P32121 409 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 CA8P35219 290 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SPAM1P38567 509 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 NSG1P42857 185 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SGSHP51688 502 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 STX1BP61266 288 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 AP2B1P63010 937 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 CYP4F8P98187 520 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 NFATC2Q13469 925 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 PEX6Q13608 980 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 PCBP2Q15366 365 aaKnown RBP eCLIP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 CDKN3Q16667 212 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 LSM12Q3MHD2 195 aaKnown RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 UNC50Q53HI1 259 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ZRANB3Q5FWF4 1079 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ZNF789Q5FWF6 425 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 PTRHD1Q6GMV3 140 aaKnown RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ZFP1Q6P2D0 407 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 PRMT9Q6P2P2 845 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 C22orf39Q6P5X5 142 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 PGM2L1Q6PCE3 622 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 RINLQ6ZS11 566 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 NEK10Q6ZWH5 1172 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 TTC7BQ86TV6 843 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 CUZD1Q86UP6 607 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ULK2Q8IYT8 1036 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 FAM9CQ8IZT9 166 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 TCAIMQ8N3R3 496 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 PTGR2Q8N8N7 351 aaPredicted RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 PCYOX1LQ8NBM8 494 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 PPFIBP2Q8ND30 876 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 OR56A4Q8NGH8 313 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 MICAL1Q8TDZ2 1067 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 AGAP11Q8TF27 550 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SLC22A17Q8WUG5 538 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ANKRD49Q8WVL7 239 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 POF1BQ8WVV4 589 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 POP5Q969H6 163 aaKnown RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 WBP2Q969T9 261 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ROPN1LQ96C74 230 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ZNF382Q96SR6 550 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 NDNQ99608 321 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 CDCA3Q99618 268 aaPredicted RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 LBHD1Q9BQE6 289 aaPredicted RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 EBF4Q9BQW3 602 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SLC25A23Q9BV35 468 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 TRIM54Q9BYV2 358 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 GSTO2Q9H4Y5 243 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SUDS3Q9H7L9 328 aaPredicted RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 RDH14Q9HBH5 336 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ZBTB26Q9HCK0 441 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SPHK2Q9NRA0 654 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SPATS2LQ9NUQ6 558 aaKnown RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 RIC8BQ9NVN3 520 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 POLR3BQ9NW08 1133 aaPredicted RBP6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SMOXQ9NWM0 555 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 GTSE1Q9NYZ3 720 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 ARMCX1Q9P291 453 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 FBXO10Q9UK96 956 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 PLA2G4CQ9UP65 541 aa6.53□□□□□ -1.36
PDCD4-209ENST00000489049 SLC27A6Q9Y2P4 619 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms