RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 FMO4P31512 558 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 CLCN7P51798 805 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 LIMK2P53671 638 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 GUCY2DQ02846 1103 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 AMZ1Q400G9 498 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 SYTL3Q4VX76 610 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 PLEKHS1Q5SXH7 462 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 TMEM71Q6P5X7 295 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 CNSTQ6PJW8 725 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 IGF2-ASQ6U949 168 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 LRRN4CLQ8ND94 238 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 GIMAP7Q8NHV1 300 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 RSC1A1Q92681 617 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 KCNJ9Q92806 393 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 ATXN7L3BQ96GX2 97 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 TMEM74Q96NL1 305 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 MVB12BQ9H7P6 319 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 SYNDIG1Q9H7V2 258 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 FAM114A2Q9NRY5 505 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 TMEM9Q9P0T7 183 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 KLHL42Q9P2K6 505 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 DKK4Q9UBT3 224 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 COMMD10Q9Y6G5 202 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 FER1L5A0AVI2 2057 aa18.18■□□□□ 0.5
PTCD3-217ENST00000488801 DMXL2Q8TDJ6 3036 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 IGHV5-10-1A0A0J9YXX1 117 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 IFRD1O00458 451 aaPredicted RBP18.17■□□□□ 0.5
PTCD3-217ENST00000488801 KPNA5O15131 536 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 UBXN7O94888 489 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 HAUS5O94927 633 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 APOA4P06727 396 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 INHBCP55103 352 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 GPX6P59796 221 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 TIAL1Q01085 375 aaKnown RBP eCLIP18.17■□□□□ 0.5
PTCD3-217ENST00000488801 CYS1Q717R9 158 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 PIM3Q86V86 326 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 RELL1Q8IUW5 271 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 PYROXD1Q8WU10 500 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 TFGQ92734 400 aaPredicted RBP18.17■□□□□ 0.5
PTCD3-217ENST00000488801 PRR11Q96HE9 360 aaPredicted RBP18.17■□□□□ 0.5
PTCD3-217ENST00000488801 AARSD1Q9BTE6 412 aaKnown RBP18.17■□□□□ 0.5
PTCD3-217ENST00000488801 SEMA6CQ9H3T2 930 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 GALPQ9UBC7 116 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 EPHA6Q9UF33 1036 aa18.17■□□□□ 0.5
PTCD3-217ENST00000488801 TMX2-CTNND1H3BSU7 103 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 AHSGP02765 367 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 PROS1P07225 676 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 GSTA2P09210 222 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 CD9P21926 228 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 CARSP49589 748 aaKnown RBP18.16■□□□□ 0.5
PTCD3-217ENST00000488801 MGAT5Q09328 741 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 HSPA14Q0VDF9 509 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 TRA2AQ13595 282 aaKnown RBP eCLIP18.16■□□□□ 0.5
PTCD3-217ENST00000488801 BRD3Q15059 726 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 TMED2Q15363 201 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 USP53Q70EK8 1073 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 ACVR1CQ8NER5 493 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 OR5K2Q8NHB8 316 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 GABPB2Q8TAK5 448 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-217ENST00000488801 SLC30A3Q99726 388 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 TFB2MQ9H5Q4 396 aaKnown RBP18.16■□□□□ 0.5
PTCD3-217ENST00000488801 SMYD2Q9NRG4 433 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 SEMA5BQ9P283 1151 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 PSAT1Q9Y617 370 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 COLEC10Q9Y6Z7 277 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 URB1O60287 2271 aaKnown RBP18.16■□□□□ 0.5
PTCD3-217ENST00000488801 EPG5Q9HCE0 2579 aa18.16■□□□□ 0.5
PTCD3-217ENST00000488801 CCDC187A0A096LP49 1063 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 TCRBV9S1A1TA0A576 114 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 TRABD2BA6NFA1 517 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 HGSO14964 777 aaPredicted RBP18.15■□□□□ 0.5
PTCD3-217ENST00000488801 DXOO77932 396 aaKnown RBP18.15■□□□□ 0.5
PTCD3-217ENST00000488801 ANKRD34CP0C6C1 535 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 TPBGLP0DKB5 382 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 SSTR1P30872 391 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 EIF3IQ13347 325 aaKnown RBP18.15■□□□□ 0.5
PTCD3-217ENST00000488801 C16orf72Q14CZ0 275 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 RBM20Q5T481 1227 aaKnown RBP18.15■□□□□ 0.5
PTCD3-217ENST00000488801 UNQ6494/PRO21346Q6UXR6 183 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 UNC5DQ6UXZ4 953 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 OTOAQ7RTW8 1153 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 ARHGAP22Q7Z5H3 698 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 SLC26A11Q86WA9 606 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 RASGRP3Q8IV61 690 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 TBC1D21Q8IYX1 336 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 OR5AR1Q8NGP9 310 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 CD200R1Q8TD46 325 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 NXPE2Q96DL1 559 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 CCDC74BQ96LY2 380 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 MENTQ9BUN1 341 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 CORO1CQ9ULV4 474 aaPredicted RBP18.15■□□□□ 0.5
PTCD3-217ENST00000488801 PCDHGA8Q9Y5G5 932 aa18.15■□□□□ 0.5
PTCD3-217ENST00000488801 SEC16AO15027 2179 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 ZFHX4Q86UP3 3567 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 PMS2P1A4D2B8 440 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 OR5K3A6NET4 321 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 FAM159BA6NKW6 160 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 C1QTNF9BB2RNN3 333 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 MATN4O95460 622 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 C1QTNF9P0C862 333 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms