RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 COPS7BQ9H9Q2 264 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-230ENST00000488543 PDP2Q9P2J9 529 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 TRAF6Q9Y4K3 522 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 ASB1Q9Y576 335 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 NUMA1Q14980 2115 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 A0A1B0GTL3 188 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 A0A1W2PQF6 199 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 RGSL1A5PLK6 1076 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 NCF1BA6NI72 391 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-230ENST00000488543 NCF1CA8MVU1 366 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-230ENST00000488543 SGTAO43765 313 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 SYNCRIPO60506 623 aaKnown RBP11.93□□□□□ -0.5
HDAC6-230ENST00000488543 ADRB3P13945 408 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 NCF1P14598 390 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-230ENST00000488543 NFKBIAP25963 317 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 NTSR1P30989 418 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 DRD3P35462 400 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 P2RY2P41231 377 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 INHBCP55103 352 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 FOLH1Q04609 750 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 MED21Q13503 144 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 CAMK2GQ13555 558 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-230ENST00000488543 CEACAM7Q14002 265 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 PDK3Q15120 406 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 CLEC6AQ6EIG7 209 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 ACAD11Q709F0 780 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 KBTBD6Q86V97 674 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 AADATQ8N5Z0 425 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 TRAM1L1Q8N609 369 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 C8orf33Q9H7E9 229 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-230ENST00000488543 MEAF6Q9HAF1 191 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 NUDT4Q9NZJ9 180 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 PCTPQ9UKL6 214 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 TMCO1Q9UM00 188 aa11.93□□□□□ -0.5
HDAC6-230ENST00000488543 A0A1B0GTW7 788 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 TRPC5OSA6NMA1 111 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 LOC730098B7Z3J9 87 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 SRFP11831 508 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 DGKAP23743 735 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 CCR7P32248 378 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 RGS4P49798 205 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 CLCQ05315 142 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 GBX1Q14549 363 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 TGFBIQ15582 683 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 LIN52Q52LA3 116 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 ANKS6Q68DC2 871 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 ERAP2Q6P179 960 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-230ENST00000488543 GK5Q6ZS86 529 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 LILRA2Q8N149 483 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 PELI3Q8N2H9 469 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 GALNT4Q8N4A0 578 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 BHLHE22Q8NFJ8 381 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-230ENST00000488543 RPLP0P6Q8NHW5 317 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 TRPC4APQ8TEL6 797 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 DNASE1L2Q92874 299 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 DCUN1D1Q96GG9 259 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 COQ10AQ96MF6 247 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 ASB2Q96Q27 587 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 RTKNQ9BST9 563 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 RSPH9Q9H1X1 276 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-230ENST00000488543 ZBTB26Q9HCK0 441 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 RAD18Q9NS91 495 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 UBAP1Q9NZ09 502 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 GMPR2Q9P2T1 348 aaKnown RBP11.92□□□□□ -0.5
HDAC6-230ENST00000488543 CA14Q9ULX7 337 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 DTNAQ9Y4J8 743 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 CKAP5Q14008 2032 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 COL4A2P08572 1712 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 AREL1O15033 823 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 MMP20O60882 483 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 MTX2O75431 263 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 FGF4P08620 206 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 FOXA1P55317 472 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 CST6Q15828 149 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 ERN2Q76MJ5 926 aaKnown RBP11.92□□□□□ -0.5
HDAC6-230ENST00000488543 ADAMTSL2Q86TH1 951 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 MYO1HQ8N1T3 1032 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 CPSF7Q8N684 471 aaKnown RBP11.92□□□□□ -0.5
HDAC6-230ENST00000488543 TRAPPC9Q96Q05 1148 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 MID1IP1Q9NPA3 183 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 DYRK4Q9NR20 520 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 KCTD5Q9NXV2 234 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 UTP6Q9NYH9 597 aaKnown RBP11.92□□□□□ -0.5
HDAC6-230ENST00000488543 CD274Q9NZQ7 290 aa11.92□□□□□ -0.5
HDAC6-230ENST00000488543 C15orf38-AP3S2A0A0A6YYH1 394 aa11.91□□□□□ -0.5
HDAC6-230ENST00000488543 A0A1W2PP55 124 aa11.91□□□□□ -0.5
HDAC6-230ENST00000488543 PSMD11O00231 422 aa11.91□□□□□ -0.5
HDAC6-230ENST00000488543 ELFN1P0C7U0 828 aa11.91□□□□□ -0.5
HDAC6-230ENST00000488543 ATP1B2P14415 290 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-230ENST00000488543 HOXB2P14652 356 aa11.91□□□□□ -0.5
HDAC6-230ENST00000488543 NELFEP18615 380 aaKnown RBP11.91□□□□□ -0.5
HDAC6-230ENST00000488543 DRD1P21728 446 aa11.91□□□□□ -0.5
HDAC6-230ENST00000488543 AOAHP28039 575 aa11.91□□□□□ -0.5
HDAC6-230ENST00000488543 ROR2Q01974 943 aaKnown RBP11.91□□□□□ -0.5
HDAC6-230ENST00000488543 LCP2Q13094 533 aa11.91□□□□□ -0.5
HDAC6-230ENST00000488543 CCINQ13939 588 aa11.91□□□□□ -0.5
HDAC6-230ENST00000488543 FLOT2Q14254 428 aa11.91□□□□□ -0.5
HDAC6-230ENST00000488543 C18orf21Q32NC0 220 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-230ENST00000488543 ZNF648Q5T619 568 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms