RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 SH3BP2P78314 561 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 SARNPP82979 210 aaKnown RBP13.82□□□□□ -0.2
COL9A2-208ENST00000488463 ANKRD20A4Q4UJ75 823 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 AARS2Q5JTZ9 985 aaKnown RBP13.82□□□□□ -0.2
COL9A2-208ENST00000488463 IRGCQ6NXR0 463 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 FAM92BQ6ZTR7 304 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 FAM129CQ86XR2 697 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 VRK3Q8IV63 474 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 C17orf53Q8N3J3 647 aaPredicted RBP13.82□□□□□ -0.2
COL9A2-208ENST00000488463 ACVR1CQ8NER5 493 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 ELMO1Q92556 727 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 LPGAT1Q92604 370 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 ZDHHC12Q96GR4 267 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 SLC41A2Q96JW4 573 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 CAPZA3Q96KX2 299 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 PPM1MQ96MI6 270 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 BBC3Q96PG8 261 aaPredicted RBP13.82□□□□□ -0.2
COL9A2-208ENST00000488463 MAP3K3Q99759 626 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 CTRCQ99895 268 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 ASPSCR1Q9BZE9 553 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 ZMYND15Q9H091 742 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 TFB2MQ9H5Q4 396 aaKnown RBP13.82□□□□□ -0.2
COL9A2-208ENST00000488463 MVB12BQ9H7P6 319 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 HRASLS2Q9NWW9 162 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 PILRAQ9UKJ1 303 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 COLEC10Q9Y6Z7 277 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 ZNF462Q96JM2 2506 aa13.82□□□□□ -0.2
COL9A2-208ENST00000488463 CTAGE9A4FU28 777 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 OR6C74A6NCV1 312 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 SDR42E2A6NKP2 422 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 BTN3A3O00478 584 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 DNALI1O14645 258 aaPredicted RBP13.81□□□□□ -0.2
COL9A2-208ENST00000488463 WT1P19544 449 aaPredicted RBP13.81□□□□□ -0.2
COL9A2-208ENST00000488463 AOAHP28039 575 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 SEPHS1P49903 392 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 KPNA2P52292 529 aaKnown RBP13.81□□□□□ -0.2
COL9A2-208ENST00000488463 BRD3Q15059 726 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 PLCL1Q15111 1095 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 ZNF789Q5FWF6 425 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 CTSL3PQ5NE16 218 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 DCAF12Q5T6F0 453 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 TMEM164Q5U3C3 297 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 CACHD1Q5VU97 1274 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 KLHL35Q6PF15 583 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 CENPUQ71F23 418 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 PPIL6Q8IXY8 311 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 SLC22A15Q8IZD6 547 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 KRT222Q8N1A0 295 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 OR52E1Q8NGJ3 308 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 OR5AR1Q8NGP9 310 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 NKD1Q969G9 470 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 TEFMQ96QE5 360 aaKnown RBP13.81□□□□□ -0.2
COL9A2-208ENST00000488463 FERD3LQ96RJ6 166 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 TTC1Q99614 292 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 PLAC1Q9HBJ0 212 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 IL1RAPL1Q9NZN1 696 aa13.81□□□□□ -0.2
COL9A2-208ENST00000488463 MAGEB16A2A368 324 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 STMND1H3BQB6 276 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 K7ENP7 123 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 IFRD1O00458 451 aaPredicted RBP13.8□□□□□ -0.2
COL9A2-208ENST00000488463 SLCO2B1O94956 709 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 DLGAP3O95886 979 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 ITGB6P18564 788 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 PPARGP37231 505 aaPredicted RBP13.8□□□□□ -0.2
COL9A2-208ENST00000488463 UCNP55089 124 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 ADARP55265 1226 aaKnown RBP13.8□□□□□ -0.2
COL9A2-208ENST00000488463 TMPRSS3P57727 454 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 CXADRP78310 365 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 PLOD1Q02809 727 aaPredicted RBP13.8□□□□□ -0.2
COL9A2-208ENST00000488463 GBX1Q14549 363 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 PPP1R7Q15435 360 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 MSS51Q4VC12 460 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 INO80CQ6PI98 192 aaPredicted RBP13.8□□□□□ -0.2
COL9A2-208ENST00000488463 PCSK4Q6UW60 755 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 TIPARPQ7Z3E1 657 aaKnown RBP13.8□□□□□ -0.2
COL9A2-208ENST00000488463 CILP2Q8IUL8 1156 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 ADGRF3Q8IZF5 1079 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 OR4E2Q8NGC2 313 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 UBXN4Q92575 508 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 CCNL2Q96S94 520 aaPredicted RBP13.8□□□□□ -0.2
COL9A2-208ENST00000488463 TCF12Q99081 682 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 CD180Q99467 661 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 MENTQ9BUN1 341 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 ANAPC5Q9UJX4 755 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 POMT2Q9UKY4 750 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 ICKQ9UPZ9 632 aa13.8□□□□□ -0.2
COL9A2-208ENST00000488463 TMEM184BQ9Y519 407 aaPredicted RBP13.8□□□□□ -0.2
COL9A2-208ENST00000488463 TLCD2A6NGC4 264 aa13.79□□□□□ -0.2
COL9A2-208ENST00000488463 BTN3A1O00481 513 aa13.79□□□□□ -0.2
COL9A2-208ENST00000488463 POLR1CO15160 346 aaPredicted RBP13.79□□□□□ -0.2
COL9A2-208ENST00000488463 RASSF9O75901 435 aa13.79□□□□□ -0.2
COL9A2-208ENST00000488463 S1PR4O95977 384 aa13.79□□□□□ -0.2
COL9A2-208ENST00000488463 FGF5P12034 268 aa13.79□□□□□ -0.2
COL9A2-208ENST00000488463 FOLR1P15328 257 aa13.79□□□□□ -0.2
COL9A2-208ENST00000488463 ZNF28P17035 718 aa13.79□□□□□ -0.2
COL9A2-208ENST00000488463 POLR2CP19387 275 aaPredicted RBP13.79□□□□□ -0.2
COL9A2-208ENST00000488463 OGNP20774 298 aaKnown RBP13.79□□□□□ -0.2
COL9A2-208ENST00000488463 VAC14Q08AM6 782 aa13.79□□□□□ -0.2
COL9A2-208ENST00000488463 PRKG2Q13237 762 aa13.79□□□□□ -0.2
COL9A2-208ENST00000488463 GRB7Q14451 532 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms