RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PRRC2AP48634 2157 aaKnown RBP3.51□□□□□ -1.85
SMC4-219ENST00000487747 ELOVL7A1L3X0 281 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 PLEKHD1A6NEE1 506 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 GPC4O75487 556 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 TRIM49P0CI25 452 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 TRIM49CP0CI26 452 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 UGT1A4P22310 534 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 CA4P22748 312 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 DMPKQ09013 629 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 PLA2G7Q13093 441 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 TSTQ16762 297 aaKnown RBP3.5□□□□□ -1.85
SMC4-219ENST00000487747 ASTE1Q2TB18 679 aaPredicted RBP3.5□□□□□ -1.85
SMC4-219ENST00000487747 PCGF3Q3KNV8 242 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 ZSCAN23Q3MJ62 389 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 PRSS33Q8NF86 280 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 ARHGEF2Q92974 986 aaKnown RBP3.5□□□□□ -1.85
SMC4-219ENST00000487747 AZIN2Q96A70 460 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 FAM81BQ96LP2 452 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 SGK494Q96LW2 274 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 SOSTQ9BQB4 213 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 GPATCH1Q9BRR8 931 aaKnown RBP3.5□□□□□ -1.85
SMC4-219ENST00000487747 FUCA2Q9BTY2 467 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 PDCL3Q9H2J4 239 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 LYVE1Q9Y5Y7 322 aa3.5□□□□□ -1.85
SMC4-219ENST00000487747 SOCS3O14543 225 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 SCAMP1O15126 338 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 TO15178 435 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 GH2P01242 217 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 RARGP13631 454 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 OPRL1P41146 370 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 RAPSNQ13702 412 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 GRTP1Q5TC63 336 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 NCEH1Q6PIU2 408 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 LSMEM2Q8N112 164 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 OR5AP2Q8NGF4 316 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 DYRK2Q92630 601 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 PLK3Q9H4B4 646 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 DNAJC18Q9H819 358 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 HHATLQ9HCP6 504 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 SDR39U1Q9NRG7 319 aaPredicted RBP3.49□□□□□ -1.85
SMC4-219ENST00000487747 PANK4Q9NVE7 773 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 NUDT4Q9NZJ9 180 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 EHD2Q9NZN4 543 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 WDR37Q9Y2I8 494 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 PCDHGA5Q9Y5G8 931 aa3.49□□□□□ -1.85
SMC4-219ENST00000487747 MED19A0JLT2 244 aaPredicted RBP3.48□□□□□ -1.85
SMC4-219ENST00000487747 A8MU10 97 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 KLF11O14901 512 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 NDUFS4O43181 175 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 KRTAP1-4P0C5Y4 121 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 MS4A2Q01362 244 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 NFATC2Q13469 925 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 JADE1Q6IE81 842 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 CPLX4Q7Z7G2 160 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 GALNT5Q7Z7M9 940 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 HOGA1Q86XE5 327 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 C11orf53Q8IXP5 236 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 GTF3AQ92664 365 aaKnown RBP3.48□□□□□ -1.85
SMC4-219ENST00000487747 NSMCE3Q96MG7 304 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 VN1R1Q9GZP7 353 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 ARRDC1-AS1Q9H2J1 176 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 RHCGQ9UBD6 479 aa3.48□□□□□ -1.85
SMC4-219ENST00000487747 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.48□□□□□ -1.85
SMC4-219ENST00000487747 ASTN2O75129 1339 aaPredicted RBP3.47□□□□□ -1.85
SMC4-219ENST00000487747 A0A1W2PPR1 153 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 A0A1W2PR77 199 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 LIPT2A6NK58 231 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 PRKRAO75569 313 aaKnown RBP3.47□□□□□ -1.85
SMC4-219ENST00000487747 NXPH2O95156 264 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 TMEM11P17152 192 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 RBMS1P29558 406 aaKnown RBP3.47□□□□□ -1.85
SMC4-219ENST00000487747 CCR10P46092 362 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 DLG2Q15700 870 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 HLA-BQ31612 363 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 KIAA0930Q6ICG6 404 aaPredicted RBP3.47□□□□□ -1.85
SMC4-219ENST00000487747 FAM114A1Q8IWE2 563 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 RNF128Q8TEB7 428 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 DACH2Q96NX9 599 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 C16orf70Q9BSU1 422 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 RAB11FIP5Q9BXF6 653 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 DGCR6LQ9BY27 220 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 JMJD4Q9H9V9 463 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 THEGQ9P2T0 379 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 FBXL17Q9UF56 701 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 CMAHPQ9Y471 501 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 ATRXP46100 2492 aa3.47□□□□□ -1.85
SMC4-219ENST00000487747 IGHV3OR16-10A0A075B7F0 116 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 A0A1W2PN81 502 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 RTN3O95197 1032 aaPredicted RBP3.46□□□□□ -1.86
SMC4-219ENST00000487747 AGR2O95994 175 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 ACTN1P12814 892 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 CYP2A7P20853 494 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 CHRNA7P36544 502 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 MMP12P39900 470 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 LEPRP48357 1165 aaKnown RBP3.46□□□□□ -1.86
SMC4-219ENST00000487747 CAMPP49913 170 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 GSDMDP57764 484 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 SNRPEP62304 92 aaKnown RBP3.46□□□□□ -1.86
SMC4-219ENST00000487747 PRKCZQ05513 592 aa3.46□□□□□ -1.86
SMC4-219ENST00000487747 ELAVL2Q12926 359 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms