RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 HEBP2Q9Y5Z4 205 aa8.31□□□□□ -1.08
PRKCB-208ENST00000487674 ALG6Q9Y672 507 aa8.31□□□□□ -1.08
PRKCB-208ENST00000487674 COLEC10Q9Y6Z7 277 aa8.31□□□□□ -1.08
PRKCB-208ENST00000487674 MED13Q9UHV7 2174 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 BLACEA4D250 179 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 ARGFXA6NJG6 315 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 TTLL8A6PVC2 850 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 AGAP14A8MT82 685 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 CFAP99D6REC4 459 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 H7C0C1 242 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 SGTAO43765 313 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 VPS4BO75351 444 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 SORBS2O94875 1100 aaKnown RBP8.3□□□□□ -1.08
PRKCB-208ENST00000487674 CRTAMO95727 393 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 KLK3P07288 261 aaPredicted RBP8.3□□□□□ -1.08
PRKCB-208ENST00000487674 RAB40ALP0C0E4 278 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 ITGALP20701 1170 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 CDH3P22223 829 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 RBL1P28749 1068 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 ADRA1AP35348 466 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 RORAP35398 523 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 PTGIRP43119 386 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 ATP5OP48047 213 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 ARCN1P48444 511 aaKnown RBP8.3□□□□□ -1.08
PRKCB-208ENST00000487674 ZNF140P52738 457 aaPredicted RBP8.3□□□□□ -1.08
PRKCB-208ENST00000487674 XIAPP98170 497 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 ABRQ12979 859 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 CHAF1BQ13112 559 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 KRT33BQ14525 404 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 CAPRIN2Q6IMN6 1127 aaKnown RBP8.3□□□□□ -1.08
PRKCB-208ENST00000487674 RANBP10Q6VN20 620 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 DAAM2Q86T65 1068 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 CDKL3Q8IVW4 592 aaPredicted RBP8.3□□□□□ -1.08
PRKCB-208ENST00000487674 DSELQ8IZU8 1212 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 NXPE1Q8N323 547 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 ENDOVQ8N8Q3 282 aaKnown RBP8.3□□□□□ -1.08
PRKCB-208ENST00000487674 SLC38A9Q8NBW4 561 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 ACVR1CQ8NER5 493 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 CPT1CQ8TCG5 803 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 ADAMTS17Q8TE56 1095 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 NAT14Q8WUY8 206 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 HEXDCQ8WVB3 486 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 LCN9Q8WX39 176 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 PPM1MQ96MI6 270 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 PPP1R2P1Q96PQ5 205 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 COPS8Q99627 209 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 NLNQ9BYT8 704 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 PITPNM3Q9BZ71 974 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 ING2Q9H160 280 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 VPS37BQ9H9H4 285 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 SYTL2Q9HCH5 934 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 C1GALT1Q9NS00 363 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 VPS4AQ9UN37 437 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 G3BP2Q9UN86 482 aaKnown RBP8.3□□□□□ -1.08
PRKCB-208ENST00000487674 SNX7Q9UNH6 387 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 AAR2Q9Y312 384 aaKnown RBP8.3□□□□□ -1.08
PRKCB-208ENST00000487674 PCDHGB7Q9Y5F8 929 aa8.3□□□□□ -1.08
PRKCB-208ENST00000487674 SHANK1Q9Y566 2161 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 ICE1Q9Y2F5 2266 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 SPTBP11277 2137 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 IGLV3-16A0A075B6K0 115 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 C17orf113A0A1B0GUU1 675 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 MACROD2A1Z1Q3 448 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 GSAPA4D1B5 854 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 SLC9B1P1A6NJY1 282 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 TMEM150CB9EJG8 249 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 AKR1B15C9JRZ8 316 aaPredicted RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 MEN1O00255 615 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 IFRD1O00458 451 aaPredicted RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 PJA2O43164 708 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 ZNF189O75820 626 aaPredicted RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 CEACAM4O75871 244 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 STK10O94804 968 aaKnown RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 LCA5LO95447 670 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 POLBP06746 335 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 POLR2CP19387 275 aaPredicted RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 CYP2A7P20853 494 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 PSMB4P28070 264 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 CTNNA1P35221 906 aaKnown RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 HADHAP40939 763 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 MAGEA1P43355 309 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 UQCRFS1P47985 274 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 PREPP48147 710 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 OTUD4Q01804 1114 aaKnown RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 OLIG2Q13516 323 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 PRPSAP1Q14558 356 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 NADK2Q4G0N4 442 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 ZNF789Q5FWF6 425 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 PLEKHS1Q5SXH7 462 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 CCDC181Q5TID7 509 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 FBXO38Q6PIJ6 1188 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 FAM198BQ6UWH4 519 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 SNX20Q7Z614 316 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 HPS6Q86YV9 775 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 CFAP206Q8IYR0 622 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 LILRA3Q8N6C8 439 aaPredicted RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 OR4E2Q8NGC2 313 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 OR13C4Q8NGS5 318 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 OR1L3Q8NH93 324 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 ACTL9Q8TC94 416 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms