RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 NTMT1Q9BV86 223 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 CAAP1Q9H8G2 361 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 SMOXQ9NWM0 555 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 PTTG2Q9NZH5 202 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 TRPS1Q9UHF7 1281 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 MAGEL2Q9UJ55 1249 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 OAZ3Q9UMX2 235 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 RNF103-CHMP3A0A140T963 221 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 CXorf51AA0A1B0GTR3 108 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 EBLN1P0CF75 366 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 CBSLP0DN79 551 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 SRCP12931 536 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 ZNF23P17027 643 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 CBSP35520 551 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 NSG1P42857 185 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 DGKQP52824 942 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 RPL38P63173 70 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 GALNT13Q8IUC8 556 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 HS6ST3Q8IZP7 471 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 FAM47BQ8NA70 645 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 HM13Q8TCT9 377 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 SCRN2Q96FV2 425 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 PPM1MQ96MI6 270 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 ADI1Q9BV57 179 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 KCTD5Q9NXV2 234 aa17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 EIF3LQ9Y262 564 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-207ENST00000486828 LILRB3O75022 631 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 NELFEP18615 380 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 MYF6P23409 242 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 SOX11P35716 441 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 CTSOP43234 321 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 DEFB103AP81534 67 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 MERTKQ12866 999 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 GLYATQ6IB77 296 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 TRIM46Q7Z4K8 759 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 RALGPS2Q86X27 583 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 ADGRG2Q8IZP9 1017 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 ECHDC3Q96DC8 303 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 LMLNQ96KR4 655 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 RPL10LQ96L21 214 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 ZBTB18Q99592 522 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 CLK4Q9HAZ1 481 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 ZDHHC3Q9NYG2 299 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 KLHL42Q9P2K6 505 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 KLQ9UEF7 1012 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 TBX21Q9UL17 535 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 PPIL1Q9Y3C6 166 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 ZFC3H1O60293 1989 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 LTBP2Q14767 1821 aa17.63■□□□□ 0.41
PDLIM7-207ENST00000486828 TRAV19A0A0A6YYK7 116 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 ABHD14A-ACY1A0A1B0GW23 586 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 CARNS1A5YM72 827 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 FFAR3O14843 346 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 GPR42O15529 346 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 PIK3CGP48736 1102 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 STK19P49842 368 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 CREMQ03060 361 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 SELPLGQ14242 412 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 AAK1Q2M2I8 961 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 SLC36A3Q495N2 470 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 LRRC66Q68CR7 880 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 USP45Q70EL2 814 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 GPR65Q8IYL9 337 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 TRIML2Q8N7C3 387 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 OR8J3Q8NGG0 315 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 OSCP1Q8WVF1 389 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 NSMCE2Q96MF7 247 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 PIF1Q9H611 641 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 HECAQ9UBI9 543 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 SLC8A2Q9UPR5 921 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 NEUROG3Q9Y4Z2 214 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 DENND4CQ5VZ89 1909 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 CCDC160A6NGH7 325 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 LEFTY2O00292 366 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 TGM5O43548 720 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 ULK1O75385 1050 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 KCNH1O95259 989 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 LDLRP01130 860 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 EPB42P16452 691 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 MTPNP58546 118 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 TUBA4AP68366 448 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 MAP7Q14244 749 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 B3GNT6Q6ZMB0 384 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 NUDT8Q8WV74 236 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 SLC13A3Q8WWT9 602 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 ASIC4Q96FT7 647 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 SUV39H2Q9H5I1 410 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 FARSBQ9NSD9 589 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 ASIC5Q9NY37 505 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 ZNF490Q9ULM2 529 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 HS3ST2Q9Y278 367 aa17.62■□□□□ 0.41
PDLIM7-207ENST00000486828 LOC730098B7Z3J9 87 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 MANBAO00462 879 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 STK16O75716 305 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 LRG1P02750 347 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 ANXA5P08758 320 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 CDH1P12830 882 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 GNPDA1P46926 289 aa17.61■□□□□ 0.41
PDLIM7-207ENST00000486828 ALDH3B2P48448 385 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms