RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 SLCO6A1Q86UG4 719 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 GALNT13Q8IUC8 556 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 ZC3H7AQ8IWR0 971 aaKnown RBP10.85□□□□□ -0.67
HDAC6-228ENST00000486227 PLD6Q8N2A8 252 aaKnown RBP10.85□□□□□ -0.67
HDAC6-228ENST00000486227 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.85□□□□□ -0.67
HDAC6-228ENST00000486227 FAM156AQ8NDB6 213 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 RAB2BQ8WUD1 216 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 NELL1Q92832 810 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 TAMM41Q96BW9 452 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 OR52B2Q96RD2 323 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 UBAP1Q9NZ09 502 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 TMEM233B4DJY2 109 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 OAZ2O95190 189 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 ANXA6P08133 673 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 MYBPC3Q14896 1274 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 ZBTB6Q15916 424 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 ZNF829Q3KNS6 432 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-228ENST00000486227 CGB2Q6NT52 195 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 FRMD7Q6ZUT3 714 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 ARMCX6Q7L4S7 300 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 TCAIMQ8N3R3 496 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 AADATQ8N5Z0 425 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 CENPNQ96H22 339 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-228ENST00000486227 RERGLQ9H628 205 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 ELAC1Q9H777 363 aaKnown RBP10.85□□□□□ -0.67
HDAC6-228ENST00000486227 SIRPGQ9P1W8 387 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 TMED5Q9Y3A6 229 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 MYH9P35579 1960 aaKnown RBP10.85□□□□□ -0.67
HDAC6-228ENST00000486227 FAM25AB3EWG3 89 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 FAM25CB3EWG5 89 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 FAM25GB3EWG6 89 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 KDELR3O43731 214 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 MTX2O75431 263 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 ERAL1O75616 437 aaKnown RBP10.85□□□□□ -0.67
HDAC6-228ENST00000486227 CLDN7O95471 211 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 IMPDH1P20839 514 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 IL12RB1P42701 662 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 CYP4F2P78329 520 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 CHIT1Q13231 466 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 PIK3R6Q5UE93 754 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 CDHR3Q6ZTQ4 885 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 TAF8Q7Z7C8 310 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 UMODL1-AS1Q8N2C9 162 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 OR2T12Q8NG77 320 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 FNDC8Q8TC99 324 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 CYB5D2Q8WUJ1 264 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 ITCHQ96J02 903 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 FANCEQ9HB96 536 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 KRT84Q9NSB2 600 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 STMN3Q9NZ72 180 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 MAPRE3Q9UPY8 281 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 WNT6Q9Y6F9 365 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 CITO14578 2027 aa10.85□□□□□ -0.67
HDAC6-228ENST00000486227 DDX60LQ5H9U9 1706 aaKnown RBP10.85□□□□□ -0.67
HDAC6-228ENST00000486227 FAM220BPB1ANY3 271 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 FAM189A1O60320 539 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 SLC7A1P30825 629 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 UBE3AQ05086 875 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 CHRNA6Q15825 494 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 CCNYL2Q5T2Q4 361 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 C17orf64Q86WR6 236 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 CMTR2Q8IYT2 770 aaKnown RBP10.84□□□□□ -0.67
HDAC6-228ENST00000486227 ST13P5Q8NFI4 369 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-228ENST00000486227 SLC22A17Q8WUG5 538 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 PROX1Q92786 737 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 ZHX1-C8orf76Q96EF9 292 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 FAIM2Q9BWQ8 316 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 RASGRP1O95267 797 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 GTF2E2P29084 291 aaKnown RBP10.84□□□□□ -0.67
HDAC6-228ENST00000486227 NTSP30990 170 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 RPS9P46781 194 aaKnown RBP10.84□□□□□ -0.67
HDAC6-228ENST00000486227 RGS1Q08116 209 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 SNAP47Q5SQN1 464 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 INTS11Q5TA45 600 aaKnown RBP10.84□□□□□ -0.67
HDAC6-228ENST00000486227 SULT1C3Q6IMI6 304 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 PAGE2Q7Z2X7 111 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 SPPL2CQ8IUH8 684 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 ZNF778Q96MU6 729 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 MUC13Q9H3R2 512 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 CD320Q9NPF0 282 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 HAS3O00219 553 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 MAFKO60675 156 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 HSMCR30P0CW71 290 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 ADH5P11766 374 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 AKT2P31751 481 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 LSM3P62310 102 aaKnown RBP10.84□□□□□ -0.67
HDAC6-228ENST00000486227 HERVK_113P63132 956 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 RING1Q06587 406 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 PLEKHG4Q58EX7 1191 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 ARSIQ5FYB1 569 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 CLLU1OSQ5K130 101 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 KCTD8Q6ZWB6 473 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 RPS27LQ71UM5 84 aaKnown RBP10.84□□□□□ -0.67
HDAC6-228ENST00000486227 CILP2Q8IUL8 1156 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 MINDY2Q8NBR6 621 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 CENPIQ92674 756 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-228ENST00000486227 ERVK-6Q9BXR3 956 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 CXCL16Q9H2A7 254 aa10.84□□□□□ -0.67
HDAC6-228ENST00000486227 INTS7Q9NVH2 962 aaKnown RBP10.84□□□□□ -0.67
HDAC6-228ENST00000486227 ZDHHC2Q9UIJ5 367 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms