RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 ZSCAN5AQ9BUG6 496 aa9.3□□□□□ -0.92
PTPN7-213ENST00000486116 POLDIP3Q9BY77 421 aaKnown RBP9.3□□□□□ -0.92
PTPN7-213ENST00000486116 UCK2Q9BZX2 261 aa9.3□□□□□ -0.92
PTPN7-213ENST00000486116 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.3□□□□□ -0.92
PTPN7-213ENST00000486116 TSPAN10Q9H1Z9 355 aaPredicted RBP9.3□□□□□ -0.92
PTPN7-213ENST00000486116 KIR3DX1Q9H7L2 352 aa9.3□□□□□ -0.92
PTPN7-213ENST00000486116 ZNF160Q9HCG1 818 aa9.3□□□□□ -0.92
PTPN7-213ENST00000486116 FAM60AQ9NP50 221 aa9.3□□□□□ -0.92
PTPN7-213ENST00000486116 NT5MQ9NPB1 228 aa9.3□□□□□ -0.92
PTPN7-213ENST00000486116 CTNND2Q9UQB3 1225 aa9.3□□□□□ -0.92
PTPN7-213ENST00000486116 AP1M2Q9Y6Q5 423 aa9.3□□□□□ -0.92
PTPN7-213ENST00000486116 GTPBP10A4D1E9 387 aaKnown RBP9.29□□□□□ -0.92
PTPN7-213ENST00000486116 FAM90A27PA6NNH2 459 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 DAPK3O43293 454 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 ZRANB2O95218 330 aaKnown RBP eCLIP9.29□□□□□ -0.92
PTPN7-213ENST00000486116 PRAMEF1O95521 474 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 WDPCPO95876 746 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 HOXC12P31275 282 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 DGKQP52824 942 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 GSCP56915 257 aaPredicted RBP9.29□□□□□ -0.92
PTPN7-213ENST00000486116 TMPRSS15P98073 1019 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 DSC2Q02487 901 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 PRKAA1Q13131 559 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 XRCC4Q13426 336 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 DPYSQ14117 519 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 NFE2L1Q14494 772 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 RBBP7Q16576 425 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 NKG7Q16617 165 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 ANKRD20A8PQ5CZ79 823 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 MARC1Q5VT66 337 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 COX15Q7KZN9 410 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 CHERPQ8IWX8 916 aaKnown RBP9.29□□□□□ -0.92
PTPN7-213ENST00000486116 BBS5Q8N3I7 341 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.29□□□□□ -0.92
PTPN7-213ENST00000486116 TRAM1L1Q8N609 369 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 SIRT6Q8N6T7 355 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 OR4E2Q8NGC2 313 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 BRIX1Q8TDN6 353 aaKnown RBP9.29□□□□□ -0.92
PTPN7-213ENST00000486116 FKBP10Q96AY3 582 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 PEBP4Q96S96 227 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 NRTNQ99748 197 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 SELENOOQ9BVL4 669 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 WDR54Q9H977 334 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 ZFYVE1Q9HBF4 777 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 MRM3Q9HC36 420 aaKnown RBP9.29□□□□□ -0.92
PTPN7-213ENST00000486116 COQ3Q9NZJ6 369 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 LRFN1Q9P244 771 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 NOCTQ9UK39 431 aaKnown RBP9.29□□□□□ -0.92
PTPN7-213ENST00000486116 PPT2Q9UMR5 302 aa9.29□□□□□ -0.92
PTPN7-213ENST00000486116 TCRBV5S1A1TA0A578 114 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 SIGLEC16A6NMB1 481 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 INAFM1C9JVW0 142 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 FAM227AF5H4B4 570 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 MATN2O00339 956 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 BTN3A3O00478 584 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 BTN3A1O00481 513 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 ZSCAN9O15535 394 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-213ENST00000486116 KCNJ13O60928 360 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 USP1O94782 785 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 HPP00738 406 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 CHRNB2P17787 502 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 SPAM1P38567 509 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 DCDC1P59894 354 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 RPL7AP62424 266 aaKnown RBP9.28□□□□□ -0.92
PTPN7-213ENST00000486116 HSF1Q00613 529 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 FMO1Q01740 532 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 OGDHQ02218 1023 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 TMEM115Q12893 351 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-213ENST00000486116 QPCTQ16769 361 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 PPP1R15BQ5SWA1 713 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 PDPK2PQ6A1A2 396 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 OVCH1Q7RTY7 1134 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 CAMKMTQ7Z624 323 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 AMZ2Q86W34 360 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 KBTBD2Q8IY47 623 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 MARVELD2Q8N4S9 558 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 TEX26Q8N6G2 289 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 ZNF655Q8N720 491 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-213ENST00000486116 C3orf20Q8ND61 904 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 SPDYE1Q8NFV5 336 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-213ENST00000486116 CCHCR1Q8TD31 782 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 SMARCE1Q969G3 411 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 RMND5BQ96G75 393 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-213ENST00000486116 C12orf66Q96MD2 445 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 CNPY3Q9BT09 278 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 SNRNP25Q9BV90 132 aaKnown RBP9.28□□□□□ -0.92
PTPN7-213ENST00000486116 NAA15Q9BXJ9 866 aaKnown RBP9.28□□□□□ -0.92
PTPN7-213ENST00000486116 WWP1Q9H0M0 922 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 VPS16Q9H269 839 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 DEF6Q9H4E7 631 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 SOX17Q9H6I2 414 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-213ENST00000486116 TXLNGQ9NUQ3 528 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 ETNK2Q9NVF9 386 aa9.28□□□□□ -0.92
PTPN7-213ENST00000486116 NFKBIL1Q9UBC1 381 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-213ENST00000486116 MRPS2Q9Y399 296 aaKnown RBP9.28□□□□□ -0.92
PTPN7-213ENST00000486116 BICDL2A1A5D9 508 aa9.27□□□□□ -0.93
PTPN7-213ENST00000486116 RNF212BA8MTL3 300 aa9.27□□□□□ -0.93
PTPN7-213ENST00000486116 FAM171A2A8MVW0 826 aa9.27□□□□□ -0.93
PTPN7-213ENST00000486116 EIF3CLB5ME19 914 aaKnown RBP9.27□□□□□ -0.93
PTPN7-213ENST00000486116 MAP3K7O43318 606 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms