RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SLC22A15Q8IZD6 547 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 ZBTB2Q8N680 514 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 SIDT2Q8NBJ9 832 aaKnown RBP11.55□□□□□ -0.56
HPS4-214ENST00000485842 OR5AR1Q8NGP9 310 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 CFAP61Q8NHU2 1237 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 RSC1A1Q92681 617 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 TFGQ92734 400 aaPredicted RBP11.55□□□□□ -0.56
HPS4-214ENST00000485842 AARSD1Q9BTE6 412 aaKnown RBP11.55□□□□□ -0.56
HPS4-214ENST00000485842 KIR3DX1Q9H7L2 352 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 MVB12BQ9H7P6 319 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 TMEM9Q9P0T7 183 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 GALPQ9UBC7 116 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 KLHL3Q9UH77 587 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 SLC24A2Q9UI40 661 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 NFU1Q9UMS0 254 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 CDYLQ9Y232 598 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 PSAT1Q9Y617 370 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 COLEC10Q9Y6Z7 277 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 TCRBV9S1A1TA0A576 114 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 AHSGP02765 367 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 GSTA2P09210 222 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 ACADLP28330 430 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 ECHS1P30084 290 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 INHBCP55103 352 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 GFERP55789 205 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 SHC2P98077 582 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 FOXK2Q01167 660 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 CFHR1Q03591 330 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 SNAP47Q5SQN1 464 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 FOXR1Q6PIV2 292 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 CCNI2Q6ZMN8 369 aaPredicted RBP11.54□□□□□ -0.56
HPS4-214ENST00000485842 CEP128Q6ZU80 1094 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 C3orf62Q6ZUJ4 267 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 STRA8Q7Z7C7 330 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 CTAGE3PQ8IX95 158 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 IFT20Q8IY31 132 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 GPATCH11Q8N954 259 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 ACVR1CQ8NER5 493 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 GIMAP7Q8NHV1 300 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 CDKL2Q92772 493 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 KCNJ9Q92806 393 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 CCDC74BQ96LY2 380 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 TMEM74Q96NL1 305 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 GPR21Q99679 349 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 SLC30A3Q99726 388 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 TRIT1Q9H3H1 467 aaKnown RBP11.54□□□□□ -0.56
HPS4-214ENST00000485842 SEMA6CQ9H3T2 930 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 EPB41L1Q9H4G0 881 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 LRRC4CQ9HCJ2 640 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 SMYD2Q9NRG4 433 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 NSMCE4AQ9NXX6 385 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 MOCS1Q9NZB8 636 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 OGFRQ9NZT2 677 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 TRMT6Q9UJA5 497 aaKnown RBP11.54□□□□□ -0.56
HPS4-214ENST00000485842 RUVBL2Q9Y230 463 aaKnown RBP11.54□□□□□ -0.56
HPS4-214ENST00000485842 TDRKHQ9Y2W6 561 aaKnown RBP11.54□□□□□ -0.56
HPS4-214ENST00000485842 MED16Q9Y2X0 877 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 MSRB2Q9Y3D2 182 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 ENTPD2Q9Y5L3 495 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 COMMD10Q9Y6G5 202 aa11.54□□□□□ -0.56
HPS4-214ENST00000485842 KIF26BQ2KJY2 2108 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 IGHV5-10-1A0A0J9YXX1 117 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 A8MU76 341 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 SLCO2B1O94956 709 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
HPS4-214ENST00000485842 SAT1P21673 171 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 MCM3P25205 808 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 STX2P32856 288 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 BDKRB1P46663 353 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 CAPZBP47756 277 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 CLCN7P51798 805 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 EFTUD2Q15029 972 aaKnown RBP eCLIP11.53□□□□□ -0.56
HPS4-214ENST00000485842 KYNUQ16719 465 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 CLPPQ16740 277 aaPredicted RBP11.53□□□□□ -0.56
HPS4-214ENST00000485842 TTLL9Q3SXZ7 439 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 ACSBG2Q5FVE4 666 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 C3orf38Q5JPI3 329 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 IRGCQ6NXR0 463 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 GALNT7Q86SF2 657 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 SLC26A11Q86WA9 606 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 SLITRK4Q8IW52 837 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 GSPT2Q8IYD1 628 aaKnown RBP11.53□□□□□ -0.56
HPS4-214ENST00000485842 CPNE9Q8IYJ1 553 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 TBC1D21Q8IYX1 336 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 CACTIN-AS1Q8N1I8 211 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 RCBTB1Q8NDN9 531 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 OR4D9Q8NGE8 314 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 OR52E1Q8NGJ3 308 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 CD200R1Q8TD46 325 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 FBF1Q8TES7 1133 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 LCN9Q8WX39 176 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 ELMO2Q96JJ3 720 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 NRTNQ99748 197 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 DPYSL5Q9BPU6 564 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 STRADBQ9C0K7 418 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 CDC42EP4Q9H3Q1 356 aaKnown RBP11.53□□□□□ -0.56
HPS4-214ENST00000485842 XKR8Q9H6D3 395 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 NINJ2Q9NZG7 142 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 TXNDC16Q9P2K2 825 aa11.53□□□□□ -0.56
HPS4-214ENST00000485842 CIDEBQ9UHD4 219 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms