RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 NEMP2A6NFY4 417 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 IFRD1O00458 451 aaPredicted RBP17.17■□□□□ 0.34
CHMP3-207ENST00000485465 MATN4O95460 622 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 F3P13726 295 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 CD1DP15813 335 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 HALP42357 657 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 ATP6V0D1P61421 351 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 FAM83EQ2M2I3 478 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 DEFB133Q30KQ1 61 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 IYDQ6PHW0 289 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 EXOC3L1Q86VI1 746 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 GATAD2AQ86YP4 633 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 PLD6Q8N2A8 252 aaKnown RBP17.17■□□□□ 0.34
CHMP3-207ENST00000485465 ZDHHC1Q8WTX9 485 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 TMEM131Q92545 1883 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 TLCD1Q96CP7 247 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 C12orf66Q96MD2 445 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 SMC6Q96SB8 1091 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 INSM2Q96T92 566 aaPredicted RBP17.17■□□□□ 0.34
CHMP3-207ENST00000485465 UNKQ9C0B0 810 aaKnown RBP17.17■□□□□ 0.34
CHMP3-207ENST00000485465 NMRAL1Q9HBL8 299 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 PARD6AQ9NPB6 346 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 DMDP11532 3685 aa17.17■□□□□ 0.34
CHMP3-207ENST00000485465 CACNA1EQ15878 2313 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 OR5K4A6NMS3 321 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 PCDHGA12O60330 932 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 SYF2O95926 243 aaKnown RBP17.16■□□□□ 0.34
CHMP3-207ENST00000485465 TOP3BO95985 862 aaKnown RBP17.16■□□□□ 0.34
CHMP3-207ENST00000485465 GSTA1P08263 222 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 ZNF883P0CG24 379 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 GIMD1P0DJR0 217 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 SLC2A4P14672 509 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 CREB1P16220 341 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 PI4KAP42356 2102 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 MAPK9P45984 424 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 RPE65Q16518 533 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 LCA5Q86VQ0 697 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 CFAP61Q8NHU2 1237 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 ASB11Q8WXH4 323 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 TFGQ92734 400 aaPredicted RBP17.16■□□□□ 0.34
CHMP3-207ENST00000485465 TSNARE1Q96NA8 513 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 FOPNLQ96NB1 174 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 GPR78Q96P69 363 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 DNAAF2Q9NVR5 837 aaKnown RBP17.16■□□□□ 0.34
CHMP3-207ENST00000485465 ZNF358Q9NW07 568 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 DCDC2Q9UHG0 476 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 IKZF3Q9UKT9 509 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 ACTL7BQ9Y614 415 aa17.16■□□□□ 0.34
CHMP3-207ENST00000485465 CFAP20Q9Y6A4 193 aaKnown RBP17.16■□□□□ 0.34
CHMP3-207ENST00000485465 ADAMTS9Q9P2N4 1935 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 TRBV23OR9-2A0A075B6M9 112 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 OR52A4PA6NMU1 304 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 B4DGG1 531 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 GFYI3L273 518 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 CDC7O00311 574 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 BTN3A1O00481 513 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 COPEO14579 308 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 FFAR2O15552 330 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 ZBTB14O43829 449 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 PSIP1O75475 530 aaKnown RBP17.15■□□□□ 0.34
CHMP3-207ENST00000485465 C8GP07360 202 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 TGM1P22735 817 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 CRHR1P34998 444 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 CCT5P48643 541 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 MAGOHP61326 146 aaKnown RBP17.15■□□□□ 0.34
CHMP3-207ENST00000485465 NHLH1Q02575 133 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 ACAP2Q15057 778 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 TSNAXIP1Q2TAA8 658 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 TTMPQ5BVD1 217 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 KLC3Q6P597 504 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 OGFOD3Q6PK18 319 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 UNC5DQ6UXZ4 953 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 RASGRP3Q8IV61 690 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 SFTPA2Q8IWL1 248 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 NAGSQ8N159 534 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 BANPQ8N9N5 519 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 KIAA1191Q96A73 305 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 ALKBH8Q96BT7 664 aaKnown RBP17.15■□□□□ 0.34
CHMP3-207ENST00000485465 ATP6V1G3Q96LB4 118 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 TFB2MQ9H5Q4 396 aaKnown RBP17.15■□□□□ 0.34
CHMP3-207ENST00000485465 IMP3Q9NV31 184 aaKnown RBP17.15■□□□□ 0.34
CHMP3-207ENST00000485465 MKS1Q9NXB0 559 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 NLGN3Q9NZ94 848 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 ZNF624Q9P2J8 865 aaPredicted RBP17.15■□□□□ 0.34
CHMP3-207ENST00000485465 ADAMTS6Q9UKP5 1117 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 ASF1AQ9Y294 204 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 HEBP2Q9Y5Z4 205 aa17.15■□□□□ 0.34
CHMP3-207ENST00000485465 KIR2DS5A0A0G2JLQ3 304 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 A0A0G2JNG1 304 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 NPEPPSL1A6NEC2 478 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 KIR2DS3K7RE56 304 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 SLC16A5O15375 505 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 GLRA3O75311 464 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 C1orf105O95561 183 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 ALPPL2P10696 532 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 MTHFD1P11586 935 aaKnown RBP17.14■□□□□ 0.33
CHMP3-207ENST00000485465 XRCC1P18887 633 aaPredicted RBP17.14■□□□□ 0.33
CHMP3-207ENST00000485465 TFEBP19484 476 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 GLRBP48167 497 aa17.14■□□□□ 0.33
CHMP3-207ENST00000485465 SP140Q13342 867 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms