RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PCDHGB7Q9Y5F8 929 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 GRID2IPA4D2P6 1211 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 NR1D1P20393 614 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 PRDX3P30048 256 aaKnown RBP11.13□□□□□ -0.63
SCFD1-206ENST00000484733 ZNF75DP51815 510 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 VAV2P52735 878 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 CACNG1Q06432 222 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 SPARCL1Q14515 664 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 AADACL2Q6P093 401 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 SERPINA9Q86WD7 417 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 SLC38A9Q8NBW4 561 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 ADAMTS17Q8TE56 1095 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 NAT14Q8WUY8 206 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 CDKN2AIPNLQ96HQ2 116 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 DNAJC1Q96KC8 554 aaKnown RBP11.13□□□□□ -0.63
SCFD1-206ENST00000484733 LACRTQ9GZZ8 138 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 SOHLH2Q9NX45 425 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 MACROD2A1Z1Q3 448 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 GOLGA6L9A6NEM1 432 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 MIF4GDA9UHW6 222 aaKnown RBP11.12□□□□□ -0.63
SCFD1-206ENST00000484733 MEN1O00255 615 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 QSOX1O00391 747 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 BTN3A3O00478 584 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 ARCN1P48444 511 aaKnown RBP11.12□□□□□ -0.63
SCFD1-206ENST00000484733 NAP1L1P55209 391 aaKnown RBP11.12□□□□□ -0.63
SCFD1-206ENST00000484733 ITIH4Q14624 930 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 ZRANB3Q5FWF4 1079 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 ZNF789Q5FWF6 425 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 FBXO38Q6PIJ6 1188 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 ARHGEF18Q6ZSZ5 1173 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 OR52E1Q8NGJ3 308 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 PPM1MQ96MI6 270 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 TRAPPC9Q96Q05 1148 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 FAM118BQ9BPY3 351 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 DPH2Q9BQC3 489 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-206ENST00000484733 NLNQ9BYT8 704 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 TRIM55Q9BYV6 548 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 CHRNA10Q9GZZ6 450 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 CHST8Q9H2A9 424 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 FAM8A1Q9UBU6 413 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 AMFRQ9UKV5 643 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 MROH6A6NGR9 719 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 C2orf74A8MZ97 194 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 BTN3A1O00481 513 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 LIN7AO14910 233 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-206ENST00000484733 MAP3K7O43318 606 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 CEACAM4O75871 244 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 PDGFAP04085 211 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 CAPN1P07384 714 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 CDKN1CP49918 316 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-206ENST00000484733 RPS18P62269 152 aaKnown RBP11.12□□□□□ -0.63
SCFD1-206ENST00000484733 KLF1Q13351 362 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-206ENST00000484733 IL10RAQ13651 578 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 P3H1Q32P28 736 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 RAD9BQ6WBX8 426 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 AMIGO1Q86WK6 493 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 HPS6Q86YV9 775 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 ADGRF3Q8IZF5 1079 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 OR1L3Q8NH93 324 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 SLC35B2Q8TB61 432 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 TFGQ92734 400 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-206ENST00000484733 SERTAD3Q9UJW9 196 aa11.12□□□□□ -0.63
SCFD1-206ENST00000484733 SPTA1P02549 2419 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 BOD1L1Q8NFC6 3051 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 GSAPA4D1B5 854 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 DDX3YO15523 660 aaKnown RBP11.11□□□□□ -0.63
SCFD1-206ENST00000484733 METTL18O95568 372 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 AP2A1O95782 977 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 HBQ1P09105 142 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 ST6GAL1P15907 406 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 PDHA2P29803 388 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 PREPP48147 710 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 PGDP52209 483 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 ABRQ12979 859 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 DBN1Q16643 649 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 LCN10Q6JVE6 187 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 PACS1Q6VY07 963 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 ATCAYQ86WG3 371 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 SYCE1Q8N0S2 351 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 UBL4BQ8N7F7 174 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 TLR10Q9BXR5 811 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 PCMTD2Q9NV79 361 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 ACTR10Q9NZ32 417 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 RIMKLBQ9ULI2 386 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 PLAAQ9Y263 795 aa11.11□□□□□ -0.63
SCFD1-206ENST00000484733 TMEM150CB9EJG8 249 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 CCL22O00626 93 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 ACADLP28330 430 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 NSG1P42857 185 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 PLOD1Q02809 727 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-206ENST00000484733 LYPLAL1Q5VWZ2 237 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 TAS2R42Q7RTR8 314 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 PEX26Q7Z412 305 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 LINC00523Q86TU6 105 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 PIANPQ8IYJ0 282 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 TXLNBQ8N3L3 684 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 FAM26EQ8N5C1 309 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 ENDOVQ8N8Q3 282 aaKnown RBP11.1□□□□□ -0.63
SCFD1-206ENST00000484733 FAM71DQ8N9W8 422 aa11.1□□□□□ -0.63
SCFD1-206ENST00000484733 GLIS1Q8NBF1 620 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms