RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 BROXQ5VW32 411 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 KLHL35Q6PF15 583 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 TRIM46Q7Z4K8 759 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 SNX20Q7Z614 316 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 THAP5Q7Z6K1 395 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 STK32CQ86UX6 486 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 SVOPLQ8N434 492 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 ZNF548Q8NEK5 533 aaPredicted RBP19.32■□□□□ 0.68
LIMS2-215ENST00000484252 OR13F1Q8NGS4 319 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 GTF2H4Q92759 462 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 EID2BQ96D98 161 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 DCUN1D5Q9BTE7 237 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 DPY30Q9C005 99 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 HPS4Q9NQG7 708 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 ELOVL2Q9NXB9 296 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.32■□□□□ 0.68
LIMS2-215ENST00000484252 CEP350Q5VT06 3117 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 SH3PXD2BA1X283 911 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 G3V2T6 193 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 ADAM12O43184 909 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 SCELO95171 688 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 IRF1P10914 325 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 MBL2P11226 248 aaPredicted RBP19.32■□□□□ 0.68
LIMS2-215ENST00000484252 ITGALP20701 1170 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 GNPDA1P46926 289 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 TMBIM6P55061 237 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 FAM117BQ6P1L5 589 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 TMEM26Q6ZUK4 368 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 NPAS4Q8IUM7 802 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 PIH1D2Q8WWB5 315 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 FIG4Q92562 907 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 NRBF2Q96F24 287 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 EGFL8Q99944 293 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 TSEN34Q9BSV6 310 aaKnown RBP19.32■□□□□ 0.68
LIMS2-215ENST00000484252 WWOXQ9NZC7 414 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 HCSTQ9UBK5 93 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 BACE2Q9Y5Z0 518 aa19.32■□□□□ 0.68
LIMS2-215ENST00000484252 A0A0U1RQS6 177 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 ARHGEF15O94989 841 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 GUCA1CO95843 209 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 EBLN1P0CF75 366 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 CTPS1P17812 591 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 MZF1P28698 734 aaPredicted RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 ENTPD1P49961 510 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 PHEXP78562 749 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 NEDD8Q15843 81 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 ZIK1Q3SY52 487 aaPredicted RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 DUS1LQ6P1R4 473 aaKnown RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 FAM151BQ6UXP7 276 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 C8orf59Q8N0T1 100 aaPredicted RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 FEM1AQ9BSK4 669 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 THUMPD3Q9BV44 507 aaKnown RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 NTMT1Q9BV86 223 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 USE1Q9NZ43 259 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 ADGRE2Q9UHX3 823 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 TSR3Q9UJK0 312 aaKnown RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 C16orf96A6NNT2 1141 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 K7EPI3 171 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 TBL1XO60907 577 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 ULK1O75385 1050 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 SLC25A14O95258 325 aaPredicted RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 PRAMEF12O95522 483 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 EEF1B2P24534 225 aaKnown RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 SHMT2P34897 504 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 NFATC2Q13469 925 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 ITIH5Q86UX2 942 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 TMEM173Q86WV6 379 aaPredicted RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 ZBTB2Q8N680 514 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 DBF4BQ8NFT6 615 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 SLC22A17Q8WUG5 538 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 HDAC2Q92769 488 aaKnown RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 MAGED4Q96JG8 741 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 ZIC5Q96T25 663 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 CLMPQ9H6B4 373 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 ASB8Q9H765 288 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 ZFYVE1Q9HBF4 777 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 RDH14Q9HBH5 336 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 LIMD1Q9UGP4 676 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 AFF4Q9UHB7 1163 aaKnown RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 FCF1Q9Y324 198 aaKnown RBP19.31■□□□□ 0.68
LIMS2-215ENST00000484252 OR51B4Q9Y5P0 310 aa19.31■□□□□ 0.68
LIMS2-215ENST00000484252 TRBV5-4A0A0C4DH59 114 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 ELOVL7A1L3X0 281 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 GAPDHSO14556 408 aaPredicted RBP19.3■□□□□ 0.68
LIMS2-215ENST00000484252 ABCB7O75027 752 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 ALPIP09923 528 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 ELK4P28324 431 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 OR1D2P34982 312 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 YAP1P46937 504 aaKnown RBP19.3■□□□□ 0.68
LIMS2-215ENST00000484252 PIK3CGP48736 1102 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 SPIDRQ14159 915 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 PTGR1Q14914 329 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 IMPG1Q17R60 797 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 FAM174BQ3ZCQ3 159 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 ATXN7L2Q5T6C5 722 aaPredicted RBP19.3■□□□□ 0.68
LIMS2-215ENST00000484252 MACC1Q6ZN28 852 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 SMYD1Q8NB12 490 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 HJURPQ8NCD3 748 aaPredicted RBP19.3■□□□□ 0.68
LIMS2-215ENST00000484252 ZNF555Q8NEP9 628 aa19.3■□□□□ 0.68
LIMS2-215ENST00000484252 PJA1Q8NG27 643 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms