RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 UNC5BQ8IZJ1 945 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 Q8N1Y9 231 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 FAM26EQ8N5C1 309 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 TEX26Q8N6G2 289 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 TEX19Q8NA77 164 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 CCHCR1Q8TD31 782 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 TEKT4Q8WW24 435 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 MISP3Q96FF7 219 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 COX14Q96I36 57 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 AGAP2Q99490 1192 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 SYT11Q9BT88 431 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 ULBP3Q9BZM4 244 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 SPRY4Q9C004 299 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 TRIM7Q9C029 511 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 HAUS4Q9H6D7 363 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 ETNK2Q9NVF9 386 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 PKD2L2Q9NZM6 624 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 RCOR3Q9P2K3 495 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-207ENST00000483407 MYO1AQ9UBC5 1043 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 CPNE7Q9UBL6 633 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 TNFRSF10DQ9UBN6 386 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 TBC1D29Q9UFV1 150 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 AMACRQ9UHK6 382 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 ADGRE2Q9UHX3 823 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 RPL26L1Q9UNX3 145 aaKnown RBP5.79□□□□□ -1.48
CSDE1-207ENST00000483407 KCNK6Q9Y257 313 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 TTLL3Q9Y4R7 772 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 RPS6KL1Q9Y6S9 549 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 BOD1L1Q8NFC6 3051 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 SPTAN1Q13813 2472 aaKnown RBP5.79□□□□□ -1.48
CSDE1-207ENST00000483407 COL12A1Q99715 3063 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 A0A0U1RQS6 177 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 C1orf232A0A0U1RR37 186 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 RGSL1A5PLK6 1076 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 LILRA5A6NI73 299 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 GPR89AB7ZAQ6 455 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 TOX3O15405 576 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 GRID2O43424 1007 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 NPHS1O60500 1241 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 KATNA1O75449 491 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 MTA2O94776 668 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 CLDN7O95471 211 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 EML2O95834 649 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 VIPP01282 170 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 ATP1A1P05023 1023 aaKnown RBP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 ANKRD34CP0C6C1 535 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 GPR89BP0CG08 455 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 PYGMP11217 842 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 AMD1P17707 334 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 DLSTP36957 453 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 BCL6P41182 706 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 GARSP41250 739 aaKnown RBP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 PRKCIP41743 596 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 SSR1P43307 286 aaKnown RBP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 SPINT3P49223 89 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 DSC2Q02487 901 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 HADHQ16836 314 aaKnown RBP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 ANKRD20A8PQ5CZ79 823 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 CYB5D1Q6P9G0 228 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 RBM43Q6ZSC3 357 aaKnown RBP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 TIPARPQ7Z3E1 657 aaKnown RBP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 ZNF571Q7Z3V5 609 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 RASGRP3Q8IV61 690 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 TRIM48Q8IWZ4 208 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 CCDC13Q8IYE1 715 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 NXPE1Q8N323 547 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 LPCAT1Q8NF37 534 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 MAML1Q92585 1016 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 STAMBPL1Q96FJ0 436 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 C9orf72Q96LT7 481 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 LYSMD1Q96S90 227 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 G6PC3Q9BUM1 346 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 MLPHQ9BV36 600 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 TBC1D10AQ9BXI6 508 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 TDRD1Q9BXT4 1180 aaKnown RBP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 ADGRE3Q9BY15 652 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 NAT10Q9H0A0 1025 aaKnown RBP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 CARD9Q9H257 536 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 OSGEPL1Q9H4B0 414 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 FAM83DQ9H4H8 585 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 UCK1Q9HA47 277 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 PCDH9Q9HC56 1237 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 PCDH18Q9HCL0 1135 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 APMAPQ9HDC9 416 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 RBM22Q9NW64 420 aaKnown RBP eCLIP5.78□□□□□ -1.48
CSDE1-207ENST00000483407 AIPL1Q9NZN9 384 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 IP6K2Q9UHH9 426 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 KCND3Q9UK17 655 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 POLHQ9Y253 713 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 CHKBQ9Y259 395 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 TP53TG5Q9Y2B4 290 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 LRP4O75096 1905 aa5.78□□□□□ -1.48
CSDE1-207ENST00000483407 MN1Q10571 1320 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-207ENST00000483407 A6NCN8 305 aa5.77□□□□□ -1.49
CSDE1-207ENST00000483407 PDZK1P1A8MUH7 402 aa5.77□□□□□ -1.49
CSDE1-207ENST00000483407 FADS2P1A8MWK0 482 aa5.77□□□□□ -1.49
CSDE1-207ENST00000483407 H7BY64 318 aa5.77□□□□□ -1.49
CSDE1-207ENST00000483407 MYO1FO00160 1098 aa5.77□□□□□ -1.49
CSDE1-207ENST00000483407 DDX3XO00571 662 aaKnown RBP eCLIP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms