RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 OSER1Q9NX31 292 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 UBA2Q9UBT2 640 aaPredicted RBP12.5□□□□□ -0.41
VPS52-218ENST00000482399 ASPDHA6ND91 283 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 NT5C1B-RDH14C9J2C7 533 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 LCKP06239 509 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 PFKLP17858 780 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 AZGP1P25311 298 aaKnown RBP12.5□□□□□ -0.41
VPS52-218ENST00000482399 PSMD8P48556 350 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 GSTM4Q03013 218 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 TP53BP2Q13625 1128 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 GTF2H2Q13888 395 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 CTXN3Q4LDR2 81 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 GTF2H2CQ6P1K8 395 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 TMC5Q6UXY8 1006 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 AGMOQ6ZNB7 445 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 ALDH16A1Q8IZ83 802 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 CADM3Q8N126 398 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 UBE2J2Q8N2K1 259 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 PGBD5Q8N414 524 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 SELENOMQ8WWX9 145 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 RSPH1Q8WYR4 309 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 DMRTB1Q96MA1 342 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 ACBD6Q9BR61 282 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 CHCHD6Q9BRQ6 235 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 AMBRA1Q9C0C7 1298 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 ELOVL6Q9H5J4 265 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 USE1Q9NZ43 259 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 CRLS1Q9UJA2 301 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 WDR81Q562E7 1941 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 TULP3O75386 442 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 EEDO75530 441 aaKnown RBP12.49□□□□□ -0.41
VPS52-218ENST00000482399 NDST3O95803 873 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 MT-ND2P03891 347 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 HTR1EP28566 365 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 PBX3P40426 434 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 EMX2Q04743 252 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 CBLBQ13191 982 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 DENND1CQ8IV53 801 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 MCMBPQ9BTE3 642 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 TPK1Q9H3S4 243 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 SIAEQ9HAT2 523 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 POLR3BQ9NW08 1133 aaPredicted RBP12.49□□□□□ -0.41
VPS52-218ENST00000482399 HHLA1C9JL84 531 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 APOA1P02647 267 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 FGF4P08620 206 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 LPOP22079 712 aaPredicted RBP12.49□□□□□ -0.41
VPS52-218ENST00000482399 COPZ1P61923 177 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 ADARB1P78563 741 aaKnown RBP12.49□□□□□ -0.41
VPS52-218ENST00000482399 EMX1Q04741 257 aaPredicted RBP12.49□□□□□ -0.41
VPS52-218ENST00000482399 RBM48Q5RL73 367 aaKnown RBP12.49□□□□□ -0.41
VPS52-218ENST00000482399 DOK6Q6PKX4 331 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 AFTPHQ6ULP2 937 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 SLC44A2Q8IWA5 706 aaPredicted RBP12.49□□□□□ -0.41
VPS52-218ENST00000482399 APOLD1Q96LR9 279 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 KRT84Q9NSB2 600 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 PCTPQ9UKL6 214 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 LCHNA4D1U4 455 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 EFCAB9A8MZ26 197 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 ZNF701M0R085 212 aaPredicted RBP12.49□□□□□ -0.41
VPS52-218ENST00000482399 PER2O15055 1255 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 RGS14O43566 566 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 MATN4O95460 622 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 GLUD1P00367 558 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 PGRP06401 933 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 RHOCP08134 193 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 RPL34P49207 117 aaKnown RBP12.49□□□□□ -0.41
VPS52-218ENST00000482399 RGS4P49798 205 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 UBE3AQ05086 875 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 HSPA14Q0VDF9 509 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 GALNT1Q10472 559 aaPredicted RBP12.49□□□□□ -0.41
VPS52-218ENST00000482399 IHHQ14623 411 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 Q6ZSR9 355 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 MON1AQ86VX9 555 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 PGAP3Q96FM1 320 aaPredicted RBP12.49□□□□□ -0.41
VPS52-218ENST00000482399 ALPK1Q96QP1 1244 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 SMOC2Q9H3U7 446 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 IKZF5Q9H5V7 419 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 CCSER2Q9H7U1 834 aa12.49□□□□□ -0.41
VPS52-218ENST00000482399 H0YAE9 185 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 RFXANKO14593 260 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 PRMT5O14744 637 aaPredicted RBP12.48□□□□□ -0.41
VPS52-218ENST00000482399 RGS10O43665 173 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 ALPIP09923 528 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 TCEA1P23193 301 aaKnown RBP12.48□□□□□ -0.41
VPS52-218ENST00000482399 DNAJB1P25685 340 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 CPT1AP50416 773 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 LRRC74AQ0VAA2 488 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 PWP1Q13610 501 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 FAM171A1Q5VUB5 890 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 TXNDC11Q6PKC3 985 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 VTCN1Q7Z7D3 282 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 AKAP14Q86UN6 197 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 ZFAND4Q86XD8 727 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 FAR1Q8WVX9 515 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 CEP44Q9C0F1 390 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 EHD1Q9H4M9 534 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 ASB8Q9H765 288 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 CARS2Q9HA77 564 aaKnown RBP12.48□□□□□ -0.41
VPS52-218ENST00000482399 NTN4Q9HB63 628 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms