RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CLEC2LP0C7M8 214 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 ACADMP11310 421 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 C21orf33P30042 268 aaPredicted RBP20.88■□□□□ 0.93
SDF4-206ENST00000478938 GALEQ14376 348 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 NECAB2Q7Z6G3 386 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 TMC8Q8IU68 726 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 CLEC4CQ8WTT0 213 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 FBXW5Q969U6 566 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 ISG20Q96AZ6 181 aaKnown RBP20.88■□□□□ 0.93
SDF4-206ENST00000478938 TESCQ96BS2 214 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 COQ8BQ96D53 544 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 ZC3H12CQ9C0D7 883 aaKnown RBP20.88■□□□□ 0.93
SDF4-206ENST00000478938 ACAD9Q9H845 621 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 MCCC2Q9HCC0 563 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 CCNB1IP1Q9NPC3 277 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 ZNF224Q9NZL3 707 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 TRAPPC4Q9Y296 219 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 GMPPBQ9Y5P6 360 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 A0A087WZ62 844 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 B4DXG7 233 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 TLL1O43897 1013 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 TNFRSF21O75509 655 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 EPHA2P29317 976 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 ETV1P50549 477 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 SLC6A3Q01959 620 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 UGP2Q16851 508 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 PLA2G4EQ3MJ16 856 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 IER5Q5VY09 327 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 KCTD11Q693B1 232 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 ZBTB44Q8NCP5 570 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 ALG9Q9H6U8 611 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 LY75O60449 1722 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 MICAL3Q7RTP6 2002 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 LINC00862A6NCI5 91 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 ACSL4O60488 711 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 CDK14O94921 469 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 TNNC2P02585 160 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 CPB1P15086 417 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 ATN1P54259 1190 aaPredicted RBP20.87■□□□□ 0.93
SDF4-206ENST00000478938 ARMCX4Q5H9R4 360 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 HABP4Q5JVS0 413 aaKnown RBP20.87■□□□□ 0.93
SDF4-206ENST00000478938 SLC46A3Q7Z3Q1 461 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 FAM131BQ86XD5 332 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 ANKRD49Q8WVL7 239 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 FAM83DQ9H4H8 585 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 SCML1Q9UN30 329 aa20.87■□□□□ 0.93
SDF4-206ENST00000478938 STX7O15400 261 aaKnown RBP20.86■□□□□ 0.93
SDF4-206ENST00000478938 RGS5O15539 181 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 SIX3O95343 332 aaPredicted RBP20.86■□□□□ 0.93
SDF4-206ENST00000478938 C1QBP02746 253 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 CYP2B6P20813 491 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 CXCR4P61073 352 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 GNA13Q14344 377 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 MAD2L1BPQ15013 274 aaPredicted RBP20.86■□□□□ 0.93
SDF4-206ENST00000478938 DDR2Q16832 855 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 SETMARQ53H47 684 aaPredicted RBP20.86■□□□□ 0.93
SDF4-206ENST00000478938 AGAP9Q5VTM2 703 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 ARHGAP17Q68EM7 881 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 CAPN13Q6MZZ7 669 aaPredicted RBP20.86■□□□□ 0.93
SDF4-206ENST00000478938 XKRXQ6PP77 449 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 ST13P5Q8NFI4 369 aaPredicted RBP20.86■□□□□ 0.93
SDF4-206ENST00000478938 REPS1Q96D71 796 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 CYP3A43Q9HB55 503 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 VNN3Q9NY84 501 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 SIX4Q9UIU6 781 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 SCAF8Q9UPN6 1271 aaKnown RBP20.86■□□□□ 0.93
SDF4-206ENST00000478938 WDR81Q562E7 1941 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 AZIN1O14977 448 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 ALPPP05187 535 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 NPY2RP49146 381 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 UBE3AQ05086 875 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 PGM5Q15124 567 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 GOLGA7BQ2TAP0 167 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 PHC2Q8IXK0 858 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 LINC00518Q8N0U6 118 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 OR8H3Q8N146 312 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 NUDT8Q8WV74 236 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 PCNPQ8WW12 178 aaKnown RBP20.86■□□□□ 0.93
SDF4-206ENST00000478938 ASB15Q8WXK1 588 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 GIMAP5Q96F15 307 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 FRMD6Q96NE9 622 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 NSUN5Q96P11 429 aaKnown RBP20.86■□□□□ 0.93
SDF4-206ENST00000478938 SIGLEC11Q96RL6 698 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 MCCC1Q96RQ3 725 aaPredicted RBP20.86■□□□□ 0.93
SDF4-206ENST00000478938 NIPAL2Q9H841 368 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 PCDHB5Q9Y5E4 795 aa20.86■□□□□ 0.93
SDF4-206ENST00000478938 COL1A2P08123 1366 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 SLC22A5O76082 557 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 SOX6P35712 828 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 POLR2JP52435 117 aaKnown RBP20.85■□□□□ 0.93
SDF4-206ENST00000478938 ZBTB37Q5TC79 503 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 GARNL3Q5VVW2 1013 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 OR10Q1Q8NGQ4 319 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 GPR151Q8TDV0 419 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 PTERQ96BW5 349 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 RHBDF1Q96CC6 855 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 TRMOQ9BU70 441 aa20.85■□□□□ 0.93
SDF4-206ENST00000478938 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.85■□□□□ 0.93
SDF4-206ENST00000478938 SLC22A4Q9H015 551 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms