RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 PRAMEP78395 509 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 RALGDSQ12967 914 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 TESK1Q15569 626 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 TRADDQ15628 312 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 PCID2Q5JVF3 399 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 DENND5AQ6IQ26 1287 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 CAPN12Q6ZSI9 719 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 CAND1Q86VP6 1230 aaKnown RBP14.22□□□□□ -0.13
USP11-207ENST00000478596 BRSK1Q8TDC3 778 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 ZNF669Q96BR6 464 aaPredicted RBP14.22□□□□□ -0.13
USP11-207ENST00000478596 PWWP2AQ96N64 755 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 TWSG1Q9GZX9 223 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 TSPYL1Q9H0U9 437 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 BPIFA1Q9NP55 256 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 RAD18Q9NS91 495 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 MAP10Q9P2G4 905 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 CD84Q9UIB8 345 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 PCDHGB7Q9Y5F8 929 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 PCDHGA6Q9Y5G7 932 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 PSMD11O00231 422 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 CACNB4O00305 520 aaPredicted RBP14.21□□□□□ -0.13
USP11-207ENST00000478596 POLR1CO15160 346 aaPredicted RBP14.21□□□□□ -0.13
USP11-207ENST00000478596 PPM1DO15297 605 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 CREG1O75629 220 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 PCCBP05166 539 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 SPAM1P38567 509 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 ETV3P41162 512 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 STC1P52823 247 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 BIRC2Q13490 618 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 FNBP1LQ5T0N5 605 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 RAET1GQ6H3X3 334 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 ZDHHC24Q6UX98 284 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 LIPIQ6XZB0 460 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 NLRP9Q7RTR0 991 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 NRROSQ86YC3 692 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 HPS6Q86YV9 775 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 MPP5Q8N3R9 675 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 OR4K2Q8NGD2 314 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 SEC14L1Q92503 715 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 PNPLA2Q96AD5 504 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 FUBP1Q96AE4 644 aaKnown RBP14.21□□□□□ -0.13
USP11-207ENST00000478596 C19orf60Q96EN9 201 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 DNAJC1Q96KC8 554 aaKnown RBP14.21□□□□□ -0.13
USP11-207ENST00000478596 LYSMD1Q96S90 227 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 MFRPQ9BY79 579 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 ANKZF1Q9H8Y5 726 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 ZC3H7BQ9UGR2 993 aaKnown RBP14.21□□□□□ -0.13
USP11-207ENST00000478596 PPIL1Q9Y3C6 166 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 ZNF451Q9Y4E5 1061 aa14.21□□□□□ -0.13
USP11-207ENST00000478596 PIPSLA2A3N6 862 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 ANKUB1A6NFN9 424 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 AURKAO14965 403 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 DPM1O60762 260 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 RECQL5O94762 991 aaPredicted RBP14.2□□□□□ -0.14
USP11-207ENST00000478596 PGAM1P18669 254 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 ITGA3P26006 1051 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 HADHAP40939 763 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 ELK3P41970 407 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 ZNF140P52738 457 aaPredicted RBP14.2□□□□□ -0.14
USP11-207ENST00000478596 TSTD2Q5T7W7 516 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 WDR74Q6RFH5 385 aaPredicted RBP14.2□□□□□ -0.14
USP11-207ENST00000478596 C6orf15Q6UXA7 325 aaPredicted RBP14.2□□□□□ -0.14
USP11-207ENST00000478596 FAM151BQ6UXP7 276 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 HSD11B1LQ7Z5J1 315 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 TTC30BQ8N4P2 665 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 FBXO36Q8NEA4 188 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 OR13C4Q8NGS5 318 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 PYROXD1Q8WU10 500 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 STYXQ8WUJ0 223 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 PTCD2Q8WV60 388 aaKnown RBP14.2□□□□□ -0.14
USP11-207ENST00000478596 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.2□□□□□ -0.14
USP11-207ENST00000478596 LRRC39Q96DD0 335 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 RANBP9Q96S59 729 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 NAT9Q9BTE0 207 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 SPATA16Q9BXB7 569 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 GSDMCQ9BYG8 508 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 LUZP4Q9P127 313 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 TAAR2Q9P1P5 351 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 SOX13Q9UN79 622 aa14.2□□□□□ -0.14
USP11-207ENST00000478596 A6NCN8 305 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 CCL22O00626 93 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 EIF3HO15372 352 aaKnown RBP eCLIP14.19□□□□□ -0.14
USP11-207ENST00000478596 KATNA1O75449 491 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 POLBP06746 335 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 ILF3Q12906 894 aaKnown RBP eCLIP14.19□□□□□ -0.14
USP11-207ENST00000478596 ZRSR2Q15696 482 aaKnown RBP14.19□□□□□ -0.14
USP11-207ENST00000478596 MSS51Q4VC12 460 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 ZDHHC20Q5W0Z9 365 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 SLC6A19Q695T7 634 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 CES3Q6UWW8 571 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 Q6ZVL8 140 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 PALM2Q8IXS6 379 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 NAGSQ8N159 534 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 PLA2G15Q8NCC3 412 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 OR6P1Q8NGX9 317 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 GABPB2Q8TAK5 448 aaPredicted RBP14.19□□□□□ -0.14
USP11-207ENST00000478596 THAP4Q8WY91 577 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 AP2M1Q96CW1 435 aa14.19□□□□□ -0.14
USP11-207ENST00000478596 SNRNP40Q96DI7 357 aaKnown RBP14.19□□□□□ -0.14
USP11-207ENST00000478596 DTD2Q96FN9 168 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms