RNA–Protein interactions for RNA: ENST00000476535.1

LCLAT1-208, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 4

Gene LCLAT1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-208ENST00000476535 SRMSQ9H3Y6 488 aa17.15■□□□□ 0.34
LCLAT1-208ENST00000476535 TFB2MQ9H5Q4 396 aaKnown RBP17.15■□□□□ 0.34
LCLAT1-208ENST00000476535 LHX9Q9NQ69 397 aa17.15■□□□□ 0.34
LCLAT1-208ENST00000476535 LATS2Q9NRM7 1088 aa17.15■□□□□ 0.34
LCLAT1-208ENST00000476535 C1GALT1Q9NS00 363 aa17.15■□□□□ 0.34
LCLAT1-208ENST00000476535 SMARCAL1Q9NZC9 954 aa17.15■□□□□ 0.34
LCLAT1-208ENST00000476535 PCDHB3Q9Y5E6 796 aa17.15■□□□□ 0.34
LCLAT1-208ENST00000476535 MRPS18BQ9Y676 258 aaKnown RBP17.15■□□□□ 0.34
LCLAT1-208ENST00000476535 CCDC162PA2VCL2 907 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 C21orf140B9A014 251 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 E7EVH7 732 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 FTH1P02794 183 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 POLR2CP19387 275 aaPredicted RBP17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 ADRA1DP25100 572 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 ACVR1Q04771 509 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 BOP1Q14137 746 aaKnown RBP17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 CCDC38Q502W7 563 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 TSTD2Q5T7W7 516 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 LYPLAL1Q5VWZ2 237 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 DRICH1Q6PGQ1 229 aaPredicted RBP17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 AFTPHQ6ULP2 937 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 PPP1R21Q6ZMI0 780 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 PRICKLE2Q7Z3G6 844 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 APOBEC4Q8WW27 367 aaKnown RBP17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 TFGQ92734 400 aaPredicted RBP17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 PEX13Q92968 403 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 SGSM3Q96HU1 749 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 CASS4Q9NQ75 786 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 RAB6BQ9NRW1 208 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 PAK5Q9P286 719 aa17.14■□□□□ 0.33
LCLAT1-208ENST00000476535 SETXQ7Z333 2677 aaKnown RBP17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 CCDC78A2IDD5 438 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 OR51F1A6NGY5 319 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 SUV39H1O43463 412 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 MSL3P1P0C860 447 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 CDH3P22223 829 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 PREPP48147 710 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 ARCN1P48444 511 aaKnown RBP17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 LMAN1P49257 510 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 PLOD1Q02809 727 aaPredicted RBP17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 DNASE1L3Q13609 305 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 SIX1Q15475 284 aaPredicted RBP17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 CCNG2Q16589 344 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 NLRP9Q7RTR0 991 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 CCDC89Q8N998 374 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 OR52E1Q8NGJ3 308 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 HDAC10Q969S8 669 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 ZNF501Q96CX3 271 aaPredicted RBP17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 RNF31Q96EP0 1072 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 TTC1Q99614 292 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 PITPNM3Q9BZ71 974 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 SYTL2Q9HCH5 934 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 KCND1Q9NSA2 647 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 ZKSCAN5Q9Y2L8 839 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 PRSS21Q9Y6M0 314 aa17.13■□□□□ 0.33
LCLAT1-208ENST00000476535 F8W8V4 182 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 BTN3A1O00481 513 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 CPNE3O75131 537 aaKnown RBP17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 GOT2P00505 430 aaKnown RBP17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 CCDC175P0C221 793 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 ETS1P14921 441 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 PRDX3P30048 256 aaKnown RBP17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 GRIA1P42261 906 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 SNX1Q13596 522 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 GPR19Q15760 415 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 DEFB109BQ30KR1 87 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 ATP1A1-AS1Q5TC04 95 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 C16orf46Q6P387 395 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 C4orf22Q6V702 233 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 ATG14Q6ZNE5 492 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 AMIGO1Q86WK6 493 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 GLIS1Q8NBF1 620 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 PHC3Q8NDX5 983 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 CT55Q8WUE5 264 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 PPM1MQ96MI6 270 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 LRFN5Q96NI6 719 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 HGH1Q9BTY7 390 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 GPR87Q9BY21 358 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 FANCEQ9HB96 536 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 EIF2B3Q9NR50 452 aaKnown RBP17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 SOHLH2Q9NX45 425 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 SLC2A6Q9UGQ3 507 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 DRG1Q9Y295 367 aaKnown RBP17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 TCAF1Q9Y4C2 921 aa17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 SNRNP200O75643 2136 aaKnown RBP17.12■□□□□ 0.33
LCLAT1-208ENST00000476535 NBASA2RRP1 2371 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 SLC5A10A0PJK1 596 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 GSAPA4D1B5 854 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 SLC9B1P1A6NJY1 282 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 C2orf74A8MZ97 194 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 BTN3A3O00478 584 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 KATNA1O75449 491 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 CREG1O75629 220 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 SCRG1O75711 98 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 NTRK1P04629 796 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 APRTP07741 180 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 OR56A5P0C7T3 313 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 ACADLP28330 430 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 NFKB2Q00653 900 aa17.11■□□□□ 0.33
LCLAT1-208ENST00000476535 FBXO38Q6PIJ6 1188 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms