RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 CLVS1Q8IUQ0 354 aaPredicted RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 HID1Q8IV36 788 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PGBD3Q8N328 593 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 CARNMT1Q8N4J0 409 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 AADATQ8N5Z0 425 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 C12orf76Q8N812 135 aaPredicted RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 ZNF513Q8N8E2 541 aaPredicted RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 KREMEN2Q8NCW0 462 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 OR8J3Q8NGG0 315 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 STAG3L4Q8TBR4 150 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PROKR1Q8TCW9 393 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 RHBDD1Q8TEB9 315 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 SLC22A17Q8WUG5 538 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 OSCP1Q8WVF1 389 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 HDAC2Q92769 488 aaKnown RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 FUBP1Q96AE4 644 aaKnown RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 BIRC7Q96CA5 298 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PHF21BQ96EK2 531 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 AURKBQ96GD4 344 aaPredicted RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 CDKN2AIPNLQ96HQ2 116 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 FUBP3Q96I24 572 aaKnown RBP eCLIP6.76□□□□□ -1.33
UBR4-212ENST00000475973 NSMCE3Q96MG7 304 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 SIGLEC11Q96RL6 698 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 ZNF382Q96SR6 550 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 MGME1Q9BQP7 344 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PAAF1Q9BRP4 392 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 SLC39A3Q9BRY0 314 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 VN1R3Q9BXE9 311 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 LRRC3Q9BY71 257 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 IRF2BPLQ9H1B7 796 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 ALG9Q9H6U8 611 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 NANOGQ9H9S0 305 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 LIN28AQ9H9Z2 209 aaKnown RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 SP110Q9HB58 689 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 CYP4F12Q9HCS2 524 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 NLE1Q9NVX2 485 aaPredicted RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 COMMD8Q9NX08 183 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 SMPD4Q9NXE4 827 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 COX16Q9P0S2 106 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 GNPTGQ9UJJ9 305 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 LEF1Q9UJU2 399 aaPredicted RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 ANAPC2Q9UJX6 822 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 IKZF3Q9UKT9 509 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 OAZ3Q9UMX2 235 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 ANKRD36A6QL64 1941 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 CCDC162PA2VCL2 907 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 CASTOR2A6NHX0 329 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 J3KR12 359 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 DFFAO00273 331 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 E2F3O00716 465 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 EI24O14681 340 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 MUSKO15146 869 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 CD3EAPO15446 510 aaKnown RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 MRPS14O60783 128 aaKnown RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 COQ9O75208 318 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 SERPINB7O75635 380 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 MLYCDO95822 493 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 GOT2P00505 430 aaKnown RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 C1RP00736 705 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 LDLRP01130 860 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 PRLP01236 227 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 HTR1AP08908 422 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 PCSK2P16519 638 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 UGT1A6P19224 532 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 GGT1P19440 569 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 ITIH1P19827 911 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 CD247P20963 164 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 PCMT1P22061 227 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 JAK1P23458 1154 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 VAMP1P23763 118 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 CRHBPP24387 322 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 RYKP34925 604 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 MAGEA2P43356 314 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 MAPKAPK2P49137 400 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 GZMMP51124 257 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 SCNN1BP51168 640 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 ALDH3A2P51648 485 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 BMXP51813 675 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 HK3P52790 923 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 SLC5A3P53794 718 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 ARSFP54793 590 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 DIO3P55073 304 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 MLLT10P55197 1068 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 TAGLNQ01995 201 aaKnown RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 NHLH1Q02575 133 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 DAG1Q14118 895 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 MRPL58Q14197 206 aaKnown RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 CYTH1Q15438 398 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 TRIP4Q15650 581 aaPredicted RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 PLA2G4EQ3MJ16 856 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 AASDHQ4L235 1098 aaPredicted RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 PITRM1Q5JRX3 1037 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 AARS2Q5JTZ9 985 aaKnown RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 C6orf136Q5SQH8 315 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 MARC1Q5VT66 337 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 ANKS6Q68DC2 871 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 MRNIPQ6NTE8 343 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 TTC33Q6PID6 262 aaPredicted RBP6.75□□□□□ -1.33
UBR4-212ENST00000475973 NEK10Q6ZWH5 1172 aa6.75□□□□□ -1.33
UBR4-212ENST00000475973 DET1Q7L5Y6 550 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms