RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 CREBZFQ9NS37 354 aa17.44■□□□□ 0.38
CCM2-207ENST00000475551 DCAF13Q9NV06 445 aaKnown RBP17.44■□□□□ 0.38
CCM2-207ENST00000475551 IKZF3Q9UKT9 509 aa17.44■□□□□ 0.38
CCM2-207ENST00000475551 INVSQ9Y283 1065 aa17.44■□□□□ 0.38
CCM2-207ENST00000475551 NYNRINQ9P2P1 1898 aaKnown RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 ASB14A6NK59 587 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 HOXC11O43248 304 aaPredicted RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 CNMDO75829 334 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 MMP2P08253 660 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 G6PDP11413 515 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 IGFBP5P24593 272 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 CXCR2P25025 360 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 DGKQP52824 942 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 CYP4F3Q08477 520 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 GBX1Q14549 363 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 SEMA3AQ14563 771 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 PON2Q15165 354 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 BRMS1LQ5PSV4 323 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 SHQ1Q6PI26 577 aaKnown RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 LRRC8DQ7L1W4 858 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 METTL4Q8N3J2 472 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 FAM83FQ8NEG4 500 aaPredicted RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 PEX13Q92968 403 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 POP5Q969H6 163 aaKnown RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 ITCHQ96J02 903 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 SNX18Q96RF0 628 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 ZIC5Q96T25 663 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 GAD1Q99259 594 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 NXF2Q9GZY0 626 aaKnown RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 GABARAPL1Q9H0R8 117 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 NT5MQ9NPB1 228 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 ANKRD12Q6UB98 2062 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 HAT1O14929 419 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 PAGE1O75459 146 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 OGNP20774 298 aaKnown RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 AGTR2P50052 363 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 RENBPP51606 427 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 PRKCDQ05655 676 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 KIAA0040Q15053 153 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 TSNQ15631 228 aaKnown RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 SIRPB2Q5JXA9 342 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 GJC2Q5T442 439 aaPredicted RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 AGAP6Q5VW22 663 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 PAQR3Q6TCH7 311 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 CCBE1Q6UXH8 406 aaPredicted RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 PRR23CQ6ZRP0 262 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 GPR149Q86SP6 731 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 CCDC103Q8IW40 242 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 RTL3Q8N8U3 475 aaKnown RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 IL17RDQ8NFM7 739 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 SLC38A4Q969I6 547 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 FUBP1Q96AE4 644 aaKnown RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 AGAP4Q96P64 663 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 THUMPD3Q9BV44 507 aaKnown RBP17.43■□□□□ 0.38
CCM2-207ENST00000475551 GALPQ9UBC7 116 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 PKP3Q9Y446 797 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 PTCH2Q9Y6C5 1203 aa17.43■□□□□ 0.38
CCM2-207ENST00000475551 MYBPHLA2RUH7 354 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 PDHXO00330 501 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 MITFO75030 526 aaPredicted RBP17.42■□□□□ 0.38
CCM2-207ENST00000475551 NRIP1P48552 1158 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 CLK1P49759 484 aaKnown RBP17.42■□□□□ 0.38
CCM2-207ENST00000475551 CLK3P49761 638 aaKnown RBP17.42■□□□□ 0.38
CCM2-207ENST00000475551 RAD51Q06609 339 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 PCBP1Q15365 356 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCM2-207ENST00000475551 UBE2UQ5VVX9 321 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 TTC23LQ6PF05 361 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 OR7G1Q8NGA0 311 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 PPTC7Q8NI37 304 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 TBC1D20Q96BZ9 403 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 PDLIM5Q96HC4 596 aaKnown RBP17.42■□□□□ 0.38
CCM2-207ENST00000475551 HHIPL1Q96JK4 782 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 NUDT5Q9UKK9 219 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 AP3M1Q9Y2T2 418 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 ENPP3O14638 875 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 IRAK2O43187 625 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 OR4F21O95013 312 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 MAXP61244 160 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 ITKQ08881 620 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 IHHQ14623 411 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 SETMARQ53H47 684 aaPredicted RBP17.42■□□□□ 0.38
CCM2-207ENST00000475551 GDPD3Q7L5L3 318 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 CYP4Z1Q86W10 505 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 IPCEF1Q8WWN9 437 aaPredicted RBP17.42■□□□□ 0.38
CCM2-207ENST00000475551 FCRL2Q96LA5 508 aaPredicted RBP17.42■□□□□ 0.38
CCM2-207ENST00000475551 SIGLEC11Q96RL6 698 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 ZNF382Q96SR6 550 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 APOL4Q9BPW4 351 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 CEP44Q9C0F1 390 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 MARCH7Q9H992 704 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 TM9SF3Q9HD45 589 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 ZNF221Q9UK13 617 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 CDH9Q9ULB4 789 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 N6AMT1Q9Y5N5 214 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 U3KQV3 271 aa17.42■□□□□ 0.38
CCM2-207ENST00000475551 TBKBP1A7MCY6 615 aa17.41■□□□□ 0.38
CCM2-207ENST00000475551 NOTOA8MTQ0 251 aa17.41■□□□□ 0.38
CCM2-207ENST00000475551 H3BRB1 525 aa17.41■□□□□ 0.38
CCM2-207ENST00000475551 CDC7O00311 574 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms