RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 RSPH14Q9UHP6 348 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 FKBPLQ9UIM3 349 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 CRLS1Q9UJA2 301 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 HEBP2Q9Y5Z4 205 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 TEP1Q99973 2627 aaKnown RBP13.59□□□□□ -0.23
CCDC78-209ENST00000474647 E7EQ34 232 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 BTN3A1O00481 513 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 LDB2O43679 373 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 SPOPO43791 374 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 SRP72O76094 671 aaKnown RBP13.58□□□□□ -0.24
CCDC78-209ENST00000474647 LDLRP01130 860 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 EPOP01588 193 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 PVRP15151 417 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 AGXTP21549 392 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 ARHGAP25P42331 645 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 NR2C2P49116 596 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 TFDP2Q14188 446 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 ELOAQ14241 798 aaKnown RBP13.58□□□□□ -0.24
CCDC78-209ENST00000474647 PLEKHN1Q494U1 663 aaPredicted RBP13.58□□□□□ -0.24
CCDC78-209ENST00000474647 BCL7AQ4VC05 210 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 ZNF789Q5FWF6 425 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 VWA5B1Q5TIE3 1220 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 CISD2Q8N5K1 135 aaKnown RBP13.58□□□□□ -0.24
CCDC78-209ENST00000474647 OR4K2Q8NGD2 314 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 HM13Q8TCT9 377 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 P3H4Q92791 437 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 N4BP2L2Q92802 583 aaPredicted RBP13.58□□□□□ -0.24
CCDC78-209ENST00000474647 DCUN1D1Q96GG9 259 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 RBM41Q96IZ5 413 aaKnown RBP13.58□□□□□ -0.24
CCDC78-209ENST00000474647 C5orf34Q96MH7 638 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 FCRL5Q96RD9 977 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 NRTNQ99748 197 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 FICDQ9BVA6 458 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 TRIM5Q9C035 493 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 ILKAPQ9H0C8 392 aaPredicted RBP13.58□□□□□ -0.24
CCDC78-209ENST00000474647 SYTL2Q9HCH5 934 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 GPN3Q9UHW5 284 aaPredicted RBP13.58□□□□□ -0.24
CCDC78-209ENST00000474647 SERTAD3Q9UJW9 196 aa13.58□□□□□ -0.24
CCDC78-209ENST00000474647 CCDC66A2RUB6 948 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 KLHL33A6NCF5 533 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 BTN3A3O00478 584 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 ZNF749O43361 778 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 PYGMP11217 842 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 RALBP11234 206 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 PRDX3P30048 256 aaKnown RBP13.57□□□□□ -0.24
CCDC78-209ENST00000474647 CDKN2BP42772 138 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 ZNF75DP51815 510 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 DEFB110Q30KQ9 67 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 LRRC38Q5VT99 294 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 MLIPQ5VWP3 458 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 LYPLAL1Q5VWZ2 237 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 MRGPREQ86SM8 312 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 HOOK3Q86VS8 718 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 CCDC50Q8IVM0 306 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 RHOT2Q8IXI1 618 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 GPR135Q8IZ08 494 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 CLEC1AQ8NC01 280 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 MRFAP1L1Q96HT8 127 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 CCM2Q9BSQ5 444 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 HGH1Q9BTY7 390 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 FAM96AQ9H5X1 160 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 SPTLC3Q9NUV7 552 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 SLC5A6Q9Y289 635 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 B3GNT3Q9Y2A9 372 aa13.57□□□□□ -0.24
CCDC78-209ENST00000474647 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC78-209ENST00000474647 ABCA12Q86UK0 2595 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 ANKUB1A6NFN9 424 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 C2orf81A6NN90 581 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 IFRD1O00458 451 aaPredicted RBP13.56□□□□□ -0.24
CCDC78-209ENST00000474647 AGTP01019 485 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 ALPPP05187 535 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 HBQ1P09105 142 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 COMTP21964 271 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 HNRNPH3P31942 346 aaKnown RBP13.56□□□□□ -0.24
CCDC78-209ENST00000474647 FOLR3P41439 243 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 PRLHRP49683 370 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 TMPRSS15P98073 1019 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 SLC9A5Q14940 896 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 TAF1AQ15573 450 aaPredicted RBP13.56□□□□□ -0.24
CCDC78-209ENST00000474647 C1orf189Q5VU69 101 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 SPOCD1Q6ZMY3 1216 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 CDHR3Q6ZTQ4 885 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 OR52E1Q8NGJ3 308 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 LINC00615Q96LM1 132 aaPredicted RBP13.56□□□□□ -0.24
CCDC78-209ENST00000474647 QKIQ96PU8 341 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC78-209ENST00000474647 TRAPPC9Q96Q05 1148 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 VAT1Q99536 393 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 DPH2Q9BQC3 489 aaPredicted RBP13.56□□□□□ -0.24
CCDC78-209ENST00000474647 APOL2Q9BQE5 337 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 XKR8Q9H6D3 395 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 COG4Q9H9E3 785 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 ZNHIT6Q9NWK9 470 aaKnown RBP13.56□□□□□ -0.24
CCDC78-209ENST00000474647 C5AR2Q9P296 337 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 NDOR1Q9UHB4 597 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 PTRH2Q9Y3E5 179 aaKnown RBP13.56□□□□□ -0.24
CCDC78-209ENST00000474647 CNTRLQ7Z7A1 2325 aa13.56□□□□□ -0.24
CCDC78-209ENST00000474647 C2orf74A8MZ97 194 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 CFAP99D6REC4 459 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 PEX12O00623 359 aa13.55□□□□□ -0.24
CCDC78-209ENST00000474647 SGTAO43765 313 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms