RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 GUCA1CO95843 209 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 ADH1CP00326 375 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 FTH1P02794 183 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 GSTM1P09488 218 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 EPB42P16452 691 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 JAK1P23458 1154 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 PRPH2P23942 346 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 SLC7A1P30825 629 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 MSX2P35548 267 aaPredicted RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 RPIAP49247 311 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 HNMTP50135 292 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 POLR2JP52435 117 aaKnown RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 AP1S2P56377 157 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 KCNK10P57789 538 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 UFM1P61960 85 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 CREB5Q02930 508 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 GSTM4Q03013 218 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 ZNF33BQ06732 778 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 MAD2L1Q13257 205 aaPredicted RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 GPM6BQ13491 265 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 CBX2Q14781 532 aaPredicted RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 ABRAXAS2Q15018 415 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 EIF4HQ15056 248 aaKnown RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 RPS6KA2Q15349 733 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 TRIP10Q15642 601 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 ZXDCQ2QGD7 858 aaPredicted RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 VPS26BQ4G0F5 336 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 ZNF658BQ4V348 819 aaPredicted RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 ATP6AP1LQ52LC2 224 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 LRRC73Q5JTD7 316 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 LDLRAP1Q5SW96 308 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 LPCAT4Q643R3 524 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 TRIM68Q6AZZ1 485 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 SCIMPQ6UWF3 145 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 LIPIQ6XZB0 460 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 Q6ZVL8 140 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 UBE2R2Q712K3 238 aaPredicted RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 ZNF765Q7L2R6 523 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 PARS2Q7L3T8 475 aaKnown RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 CYP2U1Q7Z449 544 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 ADGRD2Q7Z7M1 963 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 PTRH1Q86Y79 214 aaKnown RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 AQP12AQ8IXF9 295 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 FNDC5Q8NAU1 212 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 FAM156AQ8NDB6 213 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 ADCY4Q8NFM4 1077 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 BPIFB1Q8TDL5 484 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 BTN2A2Q8WVV5 523 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 SORCS1Q8WY21 1168 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 SMG7Q92540 1137 aaKnown RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 GLMNQ92990 594 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 TMEM125Q96AQ2 219 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 LRRC58Q96CX6 371 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 COQ10AQ96MF6 247 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 ASB16Q96NS5 453 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 APOL5Q9BWW9 433 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 SPATA16Q9BXB7 569 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 LMAN2LQ9H0V9 348 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 PCDHAC1Q9H158 963 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 YY1AP1Q9H869 796 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 TRPV4Q9HBA0 871 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 PARVBQ9HBI1 364 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 CMTM6Q9NX76 183 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 TSR3Q9UJK0 312 aaKnown RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 CNOT11Q9UKZ1 510 aaKnown RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 TCF20Q9UGU0 1960 aaKnown RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 C15orf38-AP3S2A0A0A6YYH1 394 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 MAGEA13PA6NCF6 341 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 CCDC154A6NI56 674 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 C16orf96A6NNT2 1141 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 LOC730098B7Z3J9 87 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 H0YJX3 145 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 PER2O15055 1255 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 RGS14O43566 566 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 RNASEH2AO75792 299 aaKnown RBP9.6□□□□□ -0.87
USP39-214ENST00000474572 SLCO2B1O94956 709 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 UQCRBP14927 111 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 MYOGP15173 224 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 ACPPP15309 386 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 PCSK2P16519 638 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 CYP2A7P20853 494 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 GDF5P43026 501 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 PRLHRP49683 370 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 NME5P56597 212 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 EEFSECP57772 596 aaKnown RBP9.6□□□□□ -0.87
USP39-214ENST00000474572 PCDH1Q08174 1060 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 PRKG2Q13237 762 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 BOP1Q14137 746 aaKnown RBP9.6□□□□□ -0.87
USP39-214ENST00000474572 NR6A1Q15406 480 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 ZNF284Q2VY69 593 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 PAGE3Q5JUK9 113 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 ZNF697Q5TEC3 545 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 CYP20A1Q6UW02 462 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 LAYNQ6UX15 382 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 SERPINA13PQ6UXR4 307 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 MBOAT1Q6ZNC8 495 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 ARPINQ7Z6K5 226 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 SPATA24Q86W54 205 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 VRK3Q8IV63 474 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 NPAS3Q8IXF0 933 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms