RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 EEF2KMTQ96G04 330 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TAAR6Q96RI8 345 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TRIB1Q96RU8 372 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ZNF251Q9BRH9 671 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TRAF4Q9BUZ4 470 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 SLC2A11Q9BYW1 496 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 POLR3FQ9H1D9 316 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 DUSP15Q9H1R2 295 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 OR51M1Q9H341 326 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ESRP2Q9H6T0 727 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 RNPEPL1Q9HAU8 725 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ZCCHC3Q9NUD5 404 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 SLC38A7Q9NVC3 462 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CTTNBP2NLQ9P2B4 639 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 RWDD2AQ9UIY3 292 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TUBE1Q9UJT0 475 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 C3orf18Q9UK00 162 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TRPC5Q9UL62 973 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 NIP7Q9Y221 180 aaKnown RBP eCLIP3.43□□□□□ -1.86
UBR3-208ENST00000474426 TRAF6Q9Y4K3 522 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CORINQ9Y5Q5 1042 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 A0A0J9YYE9 177 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 A8MU76 341 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 WASH4PA8MWX3 477 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SLC22A2O15244 555 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CTNSO60931 367 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 NME6O75414 186 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 SCO1O75880 301 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 DDNO94850 711 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 TRBC1P01850 177 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ERBB2P04626 1255 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 HMBSP08397 361 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 JUNDP17535 347 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SYKP43405 635 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 EPHA5P54756 1037 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ARSFP54793 590 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 GPLD1P80108 840 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 NHLH1Q02575 133 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SRSF11Q05519 484 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 ILF3Q12906 894 aaKnown RBP eCLIP3.43□□□□□ -1.86
UBR3-208ENST00000474426 DGKZQ13574 1117 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SLC12A1Q13621 1099 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 RIN1Q13671 783 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 RCAN2Q14206 197 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 FLOT2Q14254 428 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SMCO1Q147U7 214 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CA9Q16790 459 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ARHGAP15Q53QZ3 475 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 OXLD1Q5BKU9 147 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 EOGTQ5NDL2 527 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 PMF1Q6P1K2 205 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 UNC5AQ6ZN44 842 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TOM1L2Q6ZVM7 507 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 GSTA5Q7RTV2 222 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TAS1R1Q7RTX1 841 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CLYBLQ8N0X4 340 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TP53I13Q8NBR0 393 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 OR9A2Q8NGT5 310 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 OR2W6PQ8NHA6 318 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ZNF516Q92618 1163 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 P3H4Q92791 437 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 BORCS5Q969J3 196 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TESCQ96BS2 214 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CMTM5Q96DZ9 223 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SSX3Q99909 188 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 GSDMCQ9BYG8 508 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ZC3H12CQ9C0D7 883 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 ZMYND12Q9H0C1 365 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 HIPK2Q9H2X6 1198 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 IL21RQ9HBE5 538 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 IL1RAPQ9NPH3 570 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ZC4H2Q9NQZ6 224 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 MBIPQ9NS73 344 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SACM1LQ9NTJ5 587 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CCM2LQ9NUG4 571 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 ZDHHC3Q9NYG2 299 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 AHSPQ9NZD4 102 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 PEF1Q9UBV8 284 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 NDRG3Q9UGV2 375 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SLC12A6Q9UHW9 1150 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 MAN1B1Q9UKM7 699 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ADAM28Q9UKQ2 775 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 STRAPQ9Y3F4 350 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 PCDHA11Q9Y5I1 949 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 MYH13Q9UKX3 1938 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TOP2AP11388 1531 aaKnown RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 CLIP1P30622 1438 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 A0A1W2PRU2 124 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 METTL21EPA6NDL7 271 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 TRABD2BA6NFA1 517 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 OR52A4PA6NMU1 304 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SMLR1H3BR10 107 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SPRY1O43609 319 aaPredicted RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 NTSR2O95665 410 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 ITIH2P19823 946 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 RAB3AP20336 220 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 IGFBP5P24593 272 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 SFNP31947 248 aa3.42□□□□□ -1.86
UBR3-208ENST00000474426 NSFP46459 744 aaKnown RBP3.42□□□□□ -1.86
UBR3-208ENST00000474426 NDUFV1P49821 464 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms